Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi703g00015 ATGACAAATCTTCAAAAGGCTATTGCTTTTCTCTTTTATATACTTGTTATATCTTTGCTTCCATTGAAAATCACAGCATCACTAAGAACAGAAGCTGAAGCTCTTGTCAAATGGAGTCTATCACCTCCTCTTCCTTCATGGTCACTCACCAACCTTATCAACCTTTGCAACTGGAAAGCTGTTGTTTGTGACAATTCAAGTATAACTGTCTCAAAGATAAACTTGTCTAATGCCAATATCAGTGGAACACTCACTGACTTGGATTTTTCTTCTCTCCCAAACCTAACCCTCTTCAACCTCAATGGAAATAGGTTTGGTGGATTAATACCATCAACAATTGGCAACCTCTCCAAACTCAGTTTCTTGGACTTGGGAAACAACTTACTTGAAGGCACACTCCCTTCTGAGCTAGGCCAGCTAAGGGAACTTCAACATGTTAGTTTTTTCAACAACAATCTCACCGGTACCATTCCCTATCAGCTCACTGATCTCCCTAAGGTAAGTTACCTTGACTTTGGATCAAACTTTTTTGTATCTTCCTCTGACTGGTCTCAATATTCAAGCATGCCTTCCTTAAATTACCTTGGTTTGGAATTAAATGAACTCACTGGTGAGATTCCAAGTTTCATATTTGAGTGCAAGAACTTAACATACCTTGACCTCTCTCAGAACAACTGGAATGGTACAATACCAGAATCCATGTATGGTAGTTTAGGCAAACTTGAATATCTCAACCTCACAAACTGTAGGCTAGAAGGAAAACTGTCATCCAACTTGTCCATGCTCTCAAATCTCAAAAATCTTCATCTCGGTAATAACATGTTTAATAGTCCTATTCCATCAGAGATAGGATTGATGTCTAGGCTTCAAATTCTTGAACTGAACAACATTTCGGCCCGTGGGGAAATTCCTTCTTCCATAGGTCAACTAAAGGAGCTAGTGCATCTTGATCTCCGTCTTAATTTTCTTAACTCTAAAGTCCCTTCTGAGCTTGGCCTATGCATAAATCTGACTTTCATAAGTTTGGCAGGAAATAATCTAACAGGTTCTTTGCCTTTGTCATTAGCAAATTTGACCAAACTTTCAGAACTAGGATTATCAGATAATTTCTTTTCTGGTCAAATTTCTGCTTCATTGATCTCTAACTGGACTGAGTTAACTTCCTTGCAAGTTCAAAACAACAGTTTCATAGGAAATGTTCCTCCACAGATTGGCCTGTTGAAAAAAATTAATCTCCTTTTTATGTACAAAAATCTTTTCTCTGGTCCTATTCCTGAAGAGATTGGAAACTTAAAGGAAATGTCACAGTTAGACCTTTCAGCAAACCATTTCTCTGGTCCAATTCCACGAACCATTTGGAACCTCACAAACATAACAGTCATACATCTTTTCTTCAACAACCTCTCCGGAAACATTCCAGTGGAAATAGGAAACTTAACTTCACTGCAAAGATTTGATGTTGACAATAATAACTTGGATGGAGAATTGCCGCACACAATTGCTCATCTAACTTCTTTAGCTTATTTTTCTGTGTTCACAAACAACTTCTCAGGAAGCATTTCTAGAGATTTTGGAAAGAATAGTCCTTCTTTGACTAATGTCTACTTTTCAAACAATAGTTTCTCGGGAGAACTTCCTTCTGACATGTGCAGCGGTCACAATCTAATAGCTTTGTCAGTAAAAAACAACAGCTTTTCGGGGCCATTGCCAAACTCATTGAAAAATTGTTCATCTCTTGTAAGAGTTAGGCTTGATGACAACAAGTTCAGTGGGAACATCACAGAAGCTTTTGGGATTCATCCAAATCTTACTTTCATCTCACTTAGCAGAAATCATCTCGATGGTTATCTATCTCCAGATTGGGGTAAATGTATCAGCTTAACTGAGATGGAAATGAGTGGAAACCAATTTTCTGGAAAAATTCCATCTGAGCTAAGTAAGTTGAGTGAATTACAATTTCTTAGCCTGCATTCCAACGAATTCACCGGAAATATCCCCCCTGAAATTGGTGATCTAAGTCGGCTCTACATGTTCAATTTGAGCAATAACCATTTGTCCGGAGAAATCCCAGAGAGTATTGGAAAATTAGCTCAGCTTAAAATCATTGATTTATCAGATAATAATTTTAGTGGAAGCATTCCTAGAGAACTCGGTAACTCTAACGGGTTATTAAGCATGAATTTAAGCCATAACAATCTATCTGGCGTGATTCCGTATGAACTAGGCAATTTGTTCTCACTCCAATCCATGTTAGATATCAGCAGCAACAATCTTTTCGGAGAAATTCCTCAAAATCTTCAAAAGTTAGCAATGTTGGAGATTCTCAATGTATCCCACAACAATCTATCTGGAACAATCCCACAATCCTTTTCAGATATGCGCAGCCTTCAATCTGTGGACTTCTCTTACAACCACTTGTCAGGTATGATACCAACCGGTGGTGTTTTCCAGACAGAAAATGCTGAAGCTTTTGTCGGGAACTCAGGTCTGTGTGGTGATGTGAAGGGATTAACATGTTCCAAAGTATTGTCTCAAGACAACTCTGGAGGGTCCAATAAAAAGGTACTTCTTGGTGTTACTGTATCAATTGGTGGAGTATTACTTATAGGGATGATTGGTTTTGGAATCCTGCTATTTAGAAGGAAAGCCAAAAAACTTAGTGAAGAATCCGAAAGCAGTGAAGATAATGATCAATCTAACTGCATGGTATGGGGAAGAGATGGGAAATTCACATTTTCTGATCTTGTGAAAGCAACCAATGACTTCAGTGAAAAGTATTGCATTGGAAAAGGAGGATTTGGAACTGTTTATAGAGCAGAACTACCAACAGGTCAAGTTGTTGCTGTGAAAAGACTCAATATATCAGATTCTGATGACATCCCAAAAGAGAACCGCATGAGCTTCATTAATGAGATAAGGACACTTACAGAAGTGAGGCACAGGAATATAATAAAGCTTTTTGGTTTTTGTTCTAGGAGGGAAGAAATGTTCTTGGTTTATGAACATGTAGAGAGAGGAAGTTTGGGGAAAATGTTGTATGGAGAAGAAGGAAAATTGGAGCTAAGTTGGGGTACAAGGTTAGACATTGTGCAAGGATTGGCACATGCAATTGCTTACCTACATAGTGATTGTTCTCCACCAATCGTGCACAGAGATATCACACTGAACAATTTACTACTGGATTCAGATTTTGTACCTCATCTTGCAGATTTCGGCACTGCAAAACTGCTTAGCTCTAACAATTCAACCTGGACTTCAGTTGCAGGAACCTATGGCTACATGGCTCCAGAGCTAGCACAAACCATGAGGGTGACTGAAAAGTGTGATGTGTATAGTTTTGGTGTGGTGGTGTTAGAGATATTGATGGGAACACACCCAGGAGAATTCTTGAATATCCTATATTCAAACAAGTCTTTGGCATTAATGGAAGTACTTGTGAAGGATGTTATAGACCAGCGGCTTCCACCTCCTACAGAACAATTAGGTGAAACAATAATGTTCACAATAAGAGTAGCTTTGGCATGCACATCTTCTGCTCCAGAGTCTAGACCCGTGATGCGTTCTGTTGCACAAGAACTATCAGCGACTCCACACGCTCGTCTTTCTCAGCCATTTAGTACGATAACCGTAAGCAAGCTTACAGGATTACAAAAATAG 3657 0.3886 MTNLQKAIAFLFYILVISLLPLKITASLRTEAEALVKWSLSPPLPSWSLTNLINLCNWKAVVCDNSSITVSKINLSNANISGTLTDLDFSSLPNLTLFNLNGNRFGGLIPSTIGNLSKLSFLDLGNNLLEGTLPSELGQLRELQHVSFFNNNLTGTIPYQLTDLPKVSYLDFGSNFFVSSSDWSQYSSMPSLNYLGLELNELTGEIPSFIFECKNLTYLDLSQNNWNGTIPESMYGSLGKLEYLNLTNCRLEGKLSSNLSMLSNLKNLHLGNNMFNSPIPSEIGLMSRLQILELNNISARGEIPSSIGQLKELVHLDLRLNFLNSKVPSELGLCINLTFISLAGNNLTGSLPLSLANLTKLSELGLSDNFFSGQISASLISNWTELTSLQVQNNSFIGNVPPQIGLLKKINLLFMYKNLFSGPIPEEIGNLKEMSQLDLSANHFSGPIPRTIWNLTNITVIHLFFNNLSGNIPVEIGNLTSLQRFDVDNNNLDGELPHTIAHLTSLAYFSVFTNNFSGSISRDFGKNSPSLTNVYFSNNSFSGELPSDMCSGHNLIALSVKNNSFSGPLPNSLKNCSSLVRVRLDDNKFSGNITEAFGIHPNLTFISLSRNHLDGYLSPDWGKCISLTEMEMSGNQFSGKIPSELSKLSELQFLSLHSNEFTGNIPPEIGDLSRLYMFNLSNNHLSGEIPESIGKLAQLKIIDLSDNNFSGSIPRELGNSNGLLSMNLSHNNLSGVIPYELGNLFSLQSMLDISSNNLFGEIPQNLQKLAMLEILNVSHNNLSGTIPQSFSDMRSLQSVDFSYNHLSGMIPTGGVFQTENAEAFVGNSGLCGDVKGLTCSKVLSQDNSGGSNKKVLLGVTVSIGGVLLIGMIGFGILLFRRKAKKLSEESESSEDNDQSNCMVWGRDGKFTFSDLVKATNDFSEKYCIGKGGFGTVYRAELPTGQVVAVKRLNISDSDDIPKENRMSFINEIRTLTEVRHRNIIKLFGFCSRREEMFLVYEHVERGSLGKMLYGEEGKLELSWGTRLDIVQGLAHAIAYLHSDCSPPIVHRDITLNNLLLDSDFVPHLADFGTAKLLSSNNSTWTSVAGTYGYMAPELAQTMRVTEKCDVYSFGVVVLEILMGTHPGEFLNILYSNKSLALMEVLVKDVIDQRLPPPTEQLGETIMFTIRVALACTSSAPESRPVMRSVAQELSATPHARLSQPFSTITVSKLTGLQK 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi703g00015 1218 FunFam Leucine-rich repeat receptor protein kinase MSP1 884 1002 - -
Vivi703g00015 1218 Pfam Protein kinase domain 924 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi703g00015 1218 ProSitePatterns Protein kinases ATP-binding region signature. 928 950 IPR017441 GO:0005524
Vivi703g00015 1218 SMART LRR_typ_2 431 455 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 310 334 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 116 140 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 189 213 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 479 503 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 769 792 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 793 818 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 696 720 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 262 286 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 92 115 IPR003591 -
Vivi703g00015 1218 SMART LRR_typ_2 648 672 IPR003591 -
Vivi703g00015 1218 FunFam MDIS1-interacting receptor like kinase 2 isoform A 398 500 - -
Vivi703g00015 1218 ProSiteProfiles Protein kinase domain profile. 922 1201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi703g00015 1218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 503 1195 - -
Vivi703g00015 1218 SUPERFAMILY Protein kinase-like (PK-like) 901 1193 IPR011009 -
Vivi703g00015 1218 FunFam Nuclear pore complex protein NUP107 28 182 - -
Vivi703g00015 1218 Gene3D Phosphorylase Kinase; domain 1 882 1002 - -
Vivi703g00015 1218 FunFam MDIS1-interacting receptor like kinase 2 1003 1199 - -
Vivi703g00015 1218 SUPERFAMILY L domain-like 525 819 - -
Vivi703g00015 1218 FunFam MDIS1-interacting receptor like kinase 2 187 380 - -
Vivi703g00015 1218 Pfam Leucine rich repeat 190 251 IPR001611 GO:0005515
Vivi703g00015 1218 Pfam Leucine rich repeat 750 806 IPR001611 GO:0005515
Vivi703g00015 1218 SUPERFAMILY L domain-like 53 374 - -
Vivi703g00015 1218 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1048 1060 IPR008266 GO:0004672|GO:0006468
Vivi703g00015 1218 Gene3D Ribonuclease Inhibitor 183 235 IPR032675 -
Vivi703g00015 1218 Gene3D Ribonuclease Inhibitor 22 182 IPR032675 -
Vivi703g00015 1218 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 528 843 - -
Vivi703g00015 1218 Gene3D Transferase(Phosphotransferase) domain 1 1003 1206 - -
Vivi703g00015 1218 SUPERFAMILY RNI-like 279 613 - -
Vivi703g00015 1218 CDD STKc_IRAK 928 1193 - -
Vivi703g00015 1218 Gene3D Ribonuclease Inhibitor 236 498 IPR032675 -
Vivi703g00015 1218 Gene3D Ribonuclease Inhibitor 499 841 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi703g00015 6 595 Receptor kinase-like Gene Family AT4G08850 32.558 3.80e-77 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi703g00015 Pkinase 2.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi703g00015 - - gmx:100809137 1727.99