Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi702g00011 ATGTCCAAAACCACCGCATCCGCCGACGACTTCCAGACGCCGACACTAGACACGGAGTCTCCCACTCTGCTCCACTCCATTTCCGAGCACGGAGGATACTCCTACGTGAGGATGGCGTCACTAGCCGCCGCCGGCGACGTTCGCGCGGCGGAGGCGGTTAGGGAGATGGCGTGGGAGCAACTTCACTCGGGACCGTGGCACTCGGTGTTGCCGGTGTGGCGTGACGCGTACTCGATGGCGTGTCTTCACGTGGCGAAGCATCACTATGGAAACGGTGAGTTTAAGGAGGCGCTTAGGGCTTTGGATATGGGGATCATCATGGGAGGGAGTCTGCTTAGAAAGGATTTGGACTCTGCCATTGGTAAGGTTTCTGAAAAGGCTAGGAACCTTAGGGTTTCTGATGGAAGCTACCAGGATTTTGGTAGCGACGATCATCTACTCGTTGATCTAGATTTTGACGTGTCTAAGGTGCTCCAGCTTTTACCTGTTAAGTCCCTTGCGTCGAAGCTTGTGGTGAAGAGGTCTGCCCTGTCGCTGGAGAAGTTCTTGAAAGATCATTTTCTGTCTGGCTCCCCGGTTATCATTAGTGATTGCATGGCGCACTGGCCAGCCAAGAAAAACTGGAATAATAAAGATTACTTGCTAAGAGTTGCTGGTGACCGCACTGTTCCAGTTGAGGTTGGGAAAAACTATTTATGCTCAGATTGGAAGCAAGAACTAGTTACATTTTCAGAGTTTCTTGAGCGGATAAGGTCTCATAGCTGTTCTCCCAGTAGTCCTACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTTCGGAAAGATATCTTTATTCCTGACTATTGTTTTGCTGGTGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCAGCTGGAACAGTAACACCATTACACCATGATCCACATCATAACATACTTGCACAGGTTGTTGGGAAAAAATACATTAGGCTTTATCCAGCATCTTTATCTGAGGAGCTTTTCCCTTACTCAGAAACCATGCTTAGCAATTCCAGCCAGGTTGATTTAGATAACGTAGATGAAATGAAGTTTCCTAAGGTGCAAGACTTGGAATTCGTAGACTGTATTTTAGAGGAAGGTGAAATGTTATACATCCCACCAAAGTGGTGGCACTATGTGCAGTCTTTAACTACCAGTTTATCAGTTAGCTTTTGGTGGAGTGAGGGTGAATGTTCATCTCCATCCTAA 1239 0.473 MSKTTASADDFQTPTLDTESPTLLHSISEHGGYSYVRMASLAAAGDVRAAEAVREMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKHHYGNGEFKEALRALDMGIIMGGSLLRKDLDSAIGKVSEKARNLRVSDGSYQDFGSDDHLLVDLDFDVSKVLQLLPVKSLASKLVVKRSALSLEKFLKDHFLSGSPVIISDCMAHWPAKKNWNNKDYLLRVAGDRTVPVEVGKNYLCSDWKQELVTFSEFLERIRSHSCSPSSPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASLSEELFPYSETMLSNSSQVDLDNVDEMKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVQSLTTSLSVSFWWSEGECSSPS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi702g00011 412 ProSiteProfiles JmjC domain profile. 255 412 IPR003347 -
Vivi702g00011 412 Gene3D Cupin 170 404 - -
Vivi702g00011 412 SUPERFAMILY Clavaminate synthase-like 175 404 - -
Vivi702g00011 412 FunFam lysine-specific demethylase JMJ30 170 403 - -
Vivi702g00011 412 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 75 405 - -
Vivi702g00011 412 SMART cupin_9 261 408 IPR003347 -
Vivi702g00011 412 Pfam Cupin-like domain 181 404 IPR041667 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi702g00011 165 403 Acyl Lipid Metabolism Gene Families AT3G45880 25.676 7.43e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Vivi702g00011 Cupin_8 4.8e-49 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi702g00011 K24444 - gmx:100813075 691.419