Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05855 ATGGATCCCAATAATCATTTTAACACTCAAAATTCTGCTAATTTTCCATTTAACCAAAATCCCAACAATTTTCAAAATCCCAACTATTATCAAAATCCAAATCAATTTTCCAACCAACATCCTCAAAACATACCTAATTTTGGTTTTCCACCAAATTTCAACCAGTCATCCTCTGTTCCAAACTTTCAACCATATTATGGATCTATGCCGAGAAATCCATCTCAAACACCCCCGTTTAATGGTTATGTGACAATGGCGAATGCAAATTTTCCAAGTGGTGGTGTACCTGAATTTCCCGAGTTTTCAACACAACTAACTATTGGTGGCATGATGGTTTCTAATGAAGTCGGTCCAAATTCAGAGGATTCAACTCCTAAGAGCAGGAAAACTCAGCAACCAGCATGGAACACTGAACAAAATTTGGTGCTAATTAGTGGGTGGATTAAATTTGGAACAAGCAGTGTTGTCGGGAGAAACCAGAAAGGTGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGTATTGCTCATTCGATCCTCCGCGTGATGGACCTGCATGCCGAAACCGTTTTAATTATATGAACAAAGTGTTGGGTAAATGGATTGGCGCTTATGATGGCGCTAAGCATATGCAAGGAAGTGGTTGGTCGGAGAATGATGTTTTGGCAAAAGCGCAGGAATTATATGCATGTGGGAAGAATGTTAGATTCACTTTAATGGAAGAATGGCACGCTCTCCGTGATCAACCACGTTATGGTAGTCAAGTAGGAGGAAATATTGGCCCAGGAAGTAGTGGATCTAAGAGATCTCGCGAGAGTGATGCATGTGGCTCAAACACTGTAGAATCCAGTGCTCGTCCTATAGGAAGGGAGGCAGCTAAAAAAAAGGGTAAAAAGAAAAGCAAAGATAAAACCAAGAAAATGAAGATGTATCTAAAGCTAACTTCCAAAGAGCATCTAGATGACCGGAAGAACCAGCTGTTGAAAAAGTTGGAAGCCTACAATCAAAATCGTGAAATTGAAGAAAATTATATAGTCAATCGATTTAGAGAGCGTAGAAACAAAATATCGGAAGATAATGCACCTCGTAGTAGAAAATATCTCAATAGAGATCATGCAGCGGCAAACCAAAGACTAATTGACGACTACTTTGCCAATGAGCCTACATATGACGATGCAATGTTTCGTCGTCGGTACCGGATGAAAAAAAATGTTTTCCTTCGAATCGTTGGGGACCTTTCAAGTAGTGATAACTACTTCACCCAGCGAGTTGATGCAGCCAATAAAGAAGGTATATCACCCTTAGCAAAATGTACCACAGCAATGCGAATGTTAGCATATGGTGTGGTAGCATATGCGGTCGATGAGTACATCAAAATAGGAGGTACTACAACATTGGAGTTGTATCTGAGAGCACCAACCCAAGATGACCTGCAAAGAATACTACATGTTAGTGAAATGCGGGGGTTCCCAAGGATGATTGGGAGTATTGACTGCATGCACTGGGAGTGGAAAAATTGTCCTAAAGCATGGGAAGGACAATTTACTAGAGGGGATAAGGGAACCACCACAGTTATTCTTGAAGCAGTTGGAAAGGCTCCAAGTGTGAATTTCTTTGTGAATCAACGTCCATATAATATGGCATACTATCTAGCTGATGGTATCTACCCTTCTTATCCAACTTTCGTCAAATCGATTAGACTTCCTCAAAGTGAACCCGATAAATTATTTGCAAAATTTCAGGAGGGATGTCGGAAGGACATCGAACGTGCATTTGGAGTGCTCCAAGCTCGATTTAAAATCATCCGTGAACCAGCTCGCTTGTGGGACATAGCTGATTTGGGTATCATCACGAGGTCATGCATCATATTACATAATATGATTGTTGAGGATGAACGAGATTCATATTCTCAACGTTGGACCGATTTTGAGCAATCTGGGGAAAGTGGATCTAGTGCACCACAACCATACTCGACCGAGGTGTTACCCGCTTTTGCAAATCATGTGCGTGCTAGATCAGAGTTCCGTGATCCAAATGTTCATCAAGAATTGCAAGCCGATCTAGTGAAGCACATATGGACAAAGTTTGGAATGTTCCGTGATTGA 2109 0.4083 MDPNNHFNTQNSANFPFNQNPNNFQNPNYYQNPNQFSNQHPQNIPNFGFPPNFNQSSSVPNFQPYYGSMPRNPSQTPPFNGYVTMANANFPSGGVPEFPEFSTQLTIGGMMVSNEVGPNSEDSTPKSRKTQQPAWNTEQNLVLISGWIKFGTSSVVGRNQKGETYWGKIAEYCNEYCSFDPPRDGPACRNRFNYMNKVLGKWIGAYDGAKHMQGSGWSENDVLAKAQELYACGKNVRFTLMEEWHALRDQPRYGSQVGGNIGPGSSGSKRSRESDACGSNTVESSARPIGREAAKKKGKKKSKDKTKKMKMYLKLTSKEHLDDRKNQLLKKLEAYNQNREIEENYIVNRFRERRNKISEDNAPRSRKYLNRDHAAANQRLIDDYFANEPTYDDAMFRRRYRMKKNVFLRIVGDLSSSDNYFTQRVDAANKEGISPLAKCTTAMRMLAYGVVAYAVDEYIKIGGTTTLELYLRAPTQDDLQRILHVSEMRGFPRMIGSIDCMHWEWKNCPKAWEGQFTRGDKGTTTVILEAVGKAPSVNFFVNQRPYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFAKFQEGCRKDIERAFGVLQARFKIIREPARLWDIADLGIITRSCIILHNMIVEDERDSYSQRWTDFEQSGESGSSAPQPYSTEVLPAFANHVRARSEFRDPNVHQELQADLVKHIWTKFGMFRD 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05855 702 MobiDBLite consensus disorder prediction 116 135 - -
Vivi6g05855 702 MobiDBLite consensus disorder prediction 113 135 - -
Vivi6g05855 702 MobiDBLite consensus disorder prediction 252 309 - -
Vivi6g05855 702 MobiDBLite consensus disorder prediction 259 286 - -
Vivi6g05855 702 PANTHER OS12G0169200 PROTEIN 333 641 - -
Vivi6g05855 702 MobiDBLite consensus disorder prediction 293 308 - -
Vivi6g05855 702 Coils Coil 318 345 - -
Vivi6g05855 702 Pfam Plant transposon protein 532 636 IPR006912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05855 Vivi-Chr6 166257587 166260720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05855 79 300 Glutathione S-transferase Gene Family AT5G41240 29.046 5.35e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05855 - - vvo:131633225 1308.51