Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05815 ATGAACATATCACTACAATTAGCCTTAATCTTAGCATTTCTCTCCACATCACAATCATTAACACAGAGTGCACTACAAAATGATACACACGCCCTCACTGAATTCCGTCTCCAAACCGACTTCCACGGCTACCTCGTCGGTAACTGGACCGGCGAGGATGCCTGCAACTCCGCCTGGCACGGAGTTGAATGCTCCCCAAACGGCAGAGTTGTAGCTCTCTCCGTCCCTTCCCTCAATCTCCGAGGTCCGGTTCATTCTCTCTCAACGCTAACATACCTACGCTTCCTTGACCTTCACGATAACCGTTTAAACGGAACCATTCTTCCTCTCTTAAACTGTACTGATCTCGAACTACTCTACCTCTCAAGCAACGACTTCTCCGGCGACATACCACCGGAGATATCATCCTTACGGCTTCTCATCAGACTTGACATCTCTGATAACAACATCCACGGCGAAATACCTAAAGAGCTTTCGAAACTGAAATTTCTCCTCACTCTCCGGTTACAGAATAATGAACTCTCTGGTGAAGTTCCGGATCTTTCTTCTTCTCTACTCAATCTCAGAGAACTCAACATTACTAACAACGAACTCCAAGGACGCTTACCAGACGCAATGCTTACCAAATTCGGCAACAAAAGCTTCTCTGGCAACCACGGTCTCTGCGGAATGACACCATTACCAAATTGTCCTGTCACCGAAGCTCATGTTCCTCCTCCTTCTGATGACGACGATAGTTCGGAAATAGTTCCTTCAAATCCTAGCTCTATGCCAAAATCTAGTAGAAATGCTAACGGTACCATTCCATCTGAAACTCCTTCGAGCAAACGGAAAATGTTGAGTCCGGGTACTATTGTGGCGGTTACAGTGGCAGTTTCCGTGGCATTATTAGTGGTGGTTTCTTTCATGGTGGCGCAATGTTGCGGAAGAGGAGGAAAATCTAACTCAACGGTTGGCATGGATAGCGAGCTTGGAAAGAGAAAAAGCGATAGCAGCAGTGGAAGCGAGAAGAAAGGTTACACTGCAAATAGCAACAATGGCGGTGTGGATAGAGATAGTGATGGAACAACCGAAACAGAAAGAAGCAAACTAGTGTTTTTCGACAGGAGCAATGAGTTTGAGCTCGAAGATTTGCTTCGAGCTTCGGCCGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGAGCTGTTCTCGATGATGGATGCACTGTTGCTGTTAAGAGACTCAAAGATGCTAATCCTTGTGATAGGAATCAGTTTGAACAGTATATGGATGTTGTTGGAAAGCTTAGACACCCTAATGTTGTTAGGCTCAAAGCTTATTATTATGCTAAGGAAGAAAAGCTTCTGGTTTATGATTATCTCTCTAATGGAAGCTTGTATTCTCTTCTTCATGGGAACCGTGGTCCGGGGAGGATTCCGTTGGATTGGACAACAAGAATAAGCTTGGTGTTGGGGGCAGCAAGAGGCCTAGCAAGGATTCATGGAGAGTATAGTGCAGCCAAGATACCTCATGGGAATGTAAAATCTTCCAATGTGTTGCTTGACAGGAATGGAGTTGCTTGCATAGGTGACTTTGGCTTGTCGCTATTATTGAACCCTGCTCACGCGGTTGCGAGGCTGGGTGGGTCTAGAGCTCCCGAGCAAGCGGAAGGGAAGAAGCTTTCACAAGAGGCGGATGTTTATGGTTTCGGGGTGTTGGTGTTGGAAGTTTTGACAGGAAGGGCTGCTTCCTCTCAGTACTCTTCTCCTATAGGAGTTCGTGCTTGTGTGGAATCCGAGGAAGAAGAAGTGGATCTTCCGAAATGGGTTCGGTCGATTGTGAAGAAAGAGTGGACATCGGAGGTGTTTGATCAGGAACTTTTAAGGTACAAGAACATCGAAGAGGAGCTTGTTTCAATGCTGAATATAGGACTTGCTTGTGTTGTGTCGCAACCGGAGCAGAGGCCTACTATGTTGGAAGTTGTTAAGATGATCGAGGATATTAGAGTGGAACAATCTCCTCTAAGAGAGGACTATGATGAATCTCGCACTTCACTTTCACCTTCACTTGCCACTACCGAAGATTGCCTAGCTTAA 2082 0.4592 MNISLQLALILAFLSTSQSLTQSALQNDTHALTEFRLQTDFHGYLVGNWTGEDACNSAWHGVECSPNGRVVALSVPSLNLRGPVHSLSTLTYLRFLDLHDNRLNGTILPLLNCTDLELLYLSSNDFSGDIPPEISSLRLLIRLDISDNNIHGEIPKELSKLKFLLTLRLQNNELSGEVPDLSSSLLNLRELNITNNELQGRLPDAMLTKFGNKSFSGNHGLCGMTPLPNCPVTEAHVPPPSDDDDSSEIVPSNPSSMPKSSRNANGTIPSETPSSKRKMLSPGTIVAVTVAVSVALLVVVSFMVAQCCGRGGKSNSTVGMDSELGKRKSDSSSGSEKKGYTANSNNGGVDRDSDGTTETERSKLVFFDRSNEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCDRNQFEQYMDVVGKLRHPNVVRLKAYYYAKEEKLLVYDYLSNGSLYSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYSAAKIPHGNVKSSNVLLDRNGVACIGDFGLSLLLNPAHAVARLGGSRAPEQAEGKKLSQEADVYGFGVLVLEVLTGRAASSQYSSPIGVRACVESEEEEVDLPKWVRSIVKKEWTSEVFDQELLRYKNIEEELVSMLNIGLACVVSQPEQRPTMLEVVKMIEDIRVEQSPLREDYDESRTSLSPSLATTEDCLA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05815 693 ProSiteProfiles Protein kinase domain profile. 380 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05815 693 SUPERFAMILY L domain-like 26 208 - -
Vivi6g05815 693 Gene3D Ribonuclease Inhibitor 139 218 IPR032675 -
Vivi6g05815 693 Gene3D Ribonuclease Inhibitor 27 138 IPR032675 -
Vivi6g05815 693 Pfam Protein kinase domain 384 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05815 693 MobiDBLite consensus disorder prediction 312 357 - -
Vivi6g05815 693 MobiDBLite consensus disorder prediction 335 352 - -
Vivi6g05815 693 FunFam pollen receptor-like kinase 1 350 455 - -
Vivi6g05815 693 MobiDBLite consensus disorder prediction 246 279 - -
Vivi6g05815 693 MobiDBLite consensus disorder prediction 232 279 - -
Vivi6g05815 693 MobiDBLite consensus disorder prediction 671 693 - -
Vivi6g05815 693 SUPERFAMILY Protein kinase-like (PK-like) 384 660 IPR011009 -
Vivi6g05815 693 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 665 IPR046959 -
Vivi6g05815 693 FunFam Nuclear pore complex protein NUP107 25 180 - -
Vivi6g05815 693 Gene3D Phosphorylase Kinase; domain 1 349 455 - -
Vivi6g05815 693 Gene3D Transferase(Phosphotransferase) domain 1 456 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05815 Vivi-Chr6 165496799 165499726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05815 26 689 Receptor kinase-like Gene Family AT2G36570 63.338 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi6g05815 Pkinase 6.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05815 - - gmx:100808402 941.028