Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05767 ATGGGTTCATTATCTGGCACTGGTGAAATAGTTGAAGCTGATATAAGGATTTGCCAGTCCGATTCTCAGTTCAAAATATCTGAGAAAAATAACAAGCCTTTGGTAGTGAATTTGGGATATAAGGATAATATATATGATGATATTAACAAGCTGTTTGAATCAATTGCTCTTAAATCTTCTTTGCCGACAGATTTGAGTATTTCACAAGATGGTACTATGAGTCATAAGCTGAAAAAGACGTTAAAACAGCCTATGACAGTGGGTGTTCCTCGGTCGCCACGAGTTGGGAGTTCTGAGAATGTTAATTTGAAGCAGGCGTTAAGAGAACTTTGTATATCTAAGGCATCGGAAGTGGCTGCCATGAAGAGGTTATCAAAGTCGACAGCTTCTCCGAGAGTTTCGGAGGTTGGGAGGATACAAACATTGTACAGTTCAGTTGTAGATGAAGCTGGTTATTCTGGGCCTTATGTTTCTGAGGGTAAAATGCCAGAAAAAAGCAAGTCACCTTCCTTAAATAAAATATCTCAATCGATCCAAGCCATTAATTCTGCTAGGGAAATTGGTGTTACAGCTACTCAACTTGTTTCCGGGAGTTCATCGATTCAAAGTGATTCAACATGTTCGTCTAGTAAAGTTGGGTTTCAATCACAGCGTGTTGTACCTGTTCAACCAGAAAAACAAACCTCAGCATCTTCTCCGTCTACTTGTGTGTCAAATACTGGACGGAAAAGTAGGTTGCAAACAACATCTTCTTCGTCTACTTCTGTAGAGGGCAACACAGTTAAAAAACTGCCACACCGTGCCCCTCGCACAGTCAAAATGGTCATCAAGAACAAGAATGTGAGCAAGAAGAAAGTGAAGGAGGGTTTAAATTCTGCATTATGTGATCCTGCGTCAAATGAAGTTAGGAAGTCTGTTCCTGGCACAGATGGGCTGGTTTGTGAAAAATGTAGGTGTGCTTTGGAAAATACTAGGGAAGATGAAAGCAAAGAGATTACGGCCTTGGATTCTACTAGTCTTGGAACTGGAGTGAAATCGAGTAATGTGCACTCTGGTTTAAATAAAACAGGTTTGGCATCAACTAGTGGTAAAATAAGCAAAGCAGTTGCGAAGGTGGAGAAGATTCAGAAGAGCACCAAGTTGAAAGAGCAGTTTGATTTTTCACAAAGCTCGAAGAGTAGCCAAGGTGAGTACAGTAGTAGTACTAGTACCAGTGACGAGAGCAACATGAGTGGCTCAAGTTGCAGCACTAGGCCTCACATGTCAAAGGATGTTCGGTGGGAAGCCATTCGACACGCTCAAATGCAGCAAGGAGTCTTGAGCTTGAAGCATTTCAATCTTTTGAAAAAACTTGGTTGTGGAGACATCGGGACTGTATATCTTGCTGAACTAATTGGCACAAGTTGCTTGTTTGCTATTAAGGTCATGGACATTGAATTTTTGGCAAGAAGGAAGAAAATGCCCAGGGCTCAAACTGAAAGAGAAATATTAAGGATGCTTGACCATCCATTTCTTCCCACATTGTATGTGCAATTCACATCAGATAATCTCTCATGTTTAGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGATGTTTTTCGGAACTAGCAGCAAGGTTTTATGTCGCTGAAGTCCTCCTTGCTTTGGAGTACTTACACATGCTTGGAGTTGTTTACCGTGATCTGAAACCCGAAAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGATCTGTCGCTGAGGTGTGCTGTTAGCCCAACACTTCTGAAGTCGTCTTCTGATGTTGACCCTGCAAAAGTTTCTGGTCTTAGTGCACAATCAAGTTGCATTGAACCATTATGCATTGAACCGTCTTGTCAAGTTTCATGCTTCAGCCCTAGATTCCTACCTGCTGCTGCAAAAGCAAGGAAATTAAAAGCTGATGCTATTGCCCATGTCAGATCACTGCCGCAACTTGTGGCTGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGTACACACGAATACTTGGCGCCTGAGATCATCAAAGAAGAGGGACACGGAGCTGCAGTTGACTGGTGGACATTTGGTGTCTTTCTTTATGAGCTTTTATATGGTAGAACACCATTTAAAGGTTATAACAATGAAGAAACATTAGCAAATGTGGTGTCTCAAAGTCTTAGCTTCCCTGATGATCCACTTGTCAATTTTGAAGCTAAGGATCTGATTAGAGGGTTGTTAGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAGAGGGGCTGCTGAGATTAAAAAACATCCCTTCTTTGAGGGTCTTAACTGGGCCTTAATTCGTTGCGCTATCCCACCAGAACTTCCGGAGTTTTGTGATTTTGGAGTTCTAGACACAGCATCACAAGGCAAGGGTAGTAAGTATTTAGAGTATAATGAAGGAGAGCACGTGGAGTTCGAATTGTTTTAA 2484 0.4179 MGSLSGTGEIVEADIRICQSDSQFKISEKNNKPLVVNLGYKDNIYDDINKLFESIALKSSLPTDLSISQDGTMSHKLKKTLKQPMTVGVPRSPRVGSSENVNLKQALRELCISKASEVAAMKRLSKSTASPRVSEVGRIQTLYSSVVDEAGYSGPYVSEGKMPEKSKSPSLNKISQSIQAINSAREIGVTATQLVSGSSSIQSDSTCSSSKVGFQSQRVVPVQPEKQTSASSPSTCVSNTGRKSRLQTTSSSSTSVEGNTVKKLPHRAPRTVKMVIKNKNVSKKKVKEGLNSALCDPASNEVRKSVPGTDGLVCEKCRCALENTREDESKEITALDSTSLGTGVKSSNVHSGLNKTGLASTSGKISKAVAKVEKIQKSTKLKEQFDFSQSSKSSQGEYSSSTSTSDESNMSGSSCSTRPHMSKDVRWEAIRHAQMQQGVLSLKHFNLLKKLGCGDIGTVYLAELIGTSCLFAIKVMDIEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRCFSELAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSDVDPAKVSGLSAQSSCIEPLCIEPSCQVSCFSPRFLPAAAKARKLKADAIAHVRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGYNNEETLANVVSQSLSFPDDPLVNFEAKDLIRGLLVKEPENRLGSERGAAEIKKHPFFEGLNWALIRCAIPPELPEFCDFGVLDTASQGKGSKYLEYNEGEHVEFELF 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05767 827 MobiDBLite consensus disorder prediction 218 263 - -
Vivi6g05767 827 PANTHER FLIPPASE KINASE 1-RELATED 223 797 - -
Vivi6g05767 827 FunFam Serine/threonine-protein kinase D6PK-like 443 528 - -
Vivi6g05767 827 Gene3D Transferase(Phosphotransferase) domain 1 670 791 - -
Vivi6g05767 827 SMART serkin_6 445 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05767 827 MobiDBLite consensus disorder prediction 386 420 - -
Vivi6g05767 827 Pfam Protein kinase domain 446 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05767 827 Pfam Protein kinase domain 674 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05767 827 SUPERFAMILY Protein kinase-like (PK-like) 417 796 IPR011009 -
Vivi6g05767 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Vivi6g05767 827 FunFam serine/threonine-protein kinase D6PK-like 672 795 - -
Vivi6g05767 827 Gene3D Transferase(Phosphotransferase) domain 1 525 593 - -
Vivi6g05767 827 ProSiteProfiles Protein kinase domain profile. 445 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05767 827 CDD STKc_phototropin_like 443 795 - -
Vivi6g05767 827 FunFam serine/threonine-protein kinase D6PK-like 529 596 - -
Vivi6g05767 827 MobiDBLite consensus disorder prediction 218 260 - -
Vivi6g05767 827 Gene3D Phosphorylase Kinase; domain 1 443 524 - -
Vivi6g05767 827 MobiDBLite consensus disorder prediction 153 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05767 Vivi-Chr6 164272279 164276292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05767 1 827 AGC Kinase Gene Family AT3G52890 51.538 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Vivi6g05767 Pkinase 5.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05767 - K08286 psat:127125671 1291.95