Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05758 ATGGCGGAAGAGCACCGATGTGAAACTCCGGAAGGCCACAGACTCTGCGCTAACAACTGCGGCTTCTTCGGAAGCTCAGCTACGATGAATTTCTGTTCAAAATGTTACAGAGATATTCATCTGAAGGAGCAAGAACAAGCCAAAACCAAATCCACAATCGAAACCGCTCTCTCCTCTGCCTCCTCGTCATCAACCGCCGCCGCTGCTGCCGTAGTTGTTGCATCTCCGGTTATGGAGATCGAATCTCTCCCTCAATCTCAACCTCAACCACCGGTACAGTCGATCGTGACCAACGCGGCGGAAGCTTCGATCAGATCGGTTCAACCGAACCGGTGCGGGACCTGTAGAAAACGGACCGGGTTAACCGGGTTCAAGTGTAGATGTGGAATCACGTTCTGTGGGACCCACAGGTACCCGGAGAAACACGAGTGCGGTTTTGATTTCAAGGCGGTGGGGAGAGAGGAGATAGCTAAAGCGAATCCCGTGATCAAAGCCGATAAGCTGAGAAGAATCTGA 516 0.5213 MAEEHRCETPEGHRLCANNCGFFGSSATMNFCSKCYRDIHLKEQEQAKTKSTIETALSSASSSSTAAAAAVVVASPVMEIESLPQSQPQPPVQSIVTNAAEASIRSVQPNRCGTCRKRTGLTGFKCRCGITFCGTHRYPEKHECGFDFKAVGREEIAKANPVIKADKLRRI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05758 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 62 - -
Vivi6g05758 171 Gene3D - 1 67 - -
Vivi6g05758 171 Gene3D - 85 167 IPR035896 -
Vivi6g05758 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Vivi6g05758 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Vivi6g05758 171 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Vivi6g05758 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 171 - -
Vivi6g05758 171 FunFam Zinc finger AN1-type containing 6 85 167 - -
Vivi6g05758 171 SUPERFAMILY AN1-like Zinc finger 97 166 IPR035896 -
Vivi6g05758 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Vivi6g05758 171 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Vivi6g05758 171 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05758 Vivi-Chr6 164163640 164164846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05758 1 171 C2H2 Transcription Factor Family AT3G52800 52.326 9.03e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05758 - - gmx:100789686 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05758 6 164163640 164164846 Vivi6g05758 6 164163640 164164846 ECH