Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05744 ATGATGGTAAGGGAGGGAGAGATGAATTGGCAACAAGGGGAGGTGGAATCGTTGCAGCGGGAGGAAGAAGCGATTAGAAACGATGTTAACAATGTCATGTCTTCGTCGCTCGGAAGACAGTCATCGTCGATATATTCGCTCACCTTGGACGAGTTTCAGCATAGTTTATGTGAGAGTGGGAAGAATTTCGGGTCGATGAATATGGATGAGTTTCTGAGTAGTATTTGGAATGCAGAAGAAAACCAACAACAAGGTGCTTCGAATAATAATAACAACTTGTCTGTGATTCAGAAGGGGATTAGTAAACAGGCGAGTCTTCCTCGCCAAAATTCGTTGTCGATTCCTGCACCTCTTTGCAGGAAGACTGTAGAACAGGTTTGGTCTGAGATACACAGAGAACAACAGCAACAGCAAAACCTCCATCACAGCAATGTTGCTCATAATACCGAGTCTACTCCTCGACAACCGACTTTTGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTGTGGTTAGGGAACAACAGTCTGCCATGCAGGTTCCAATAGTACCTCCTGCAGTATCATCTCACCGGCCGCAGCAGCATTACACTGCGATGTATCCGAATAACACAGCTACAATGGCTCAGGCTGCTCCTTTTGCTATTGGCGGAGGCGGTGGGAATGTGGTTGTGCCAACTTACCAAGCGGTGGCTCAGGGTGGTGGGGCAATCGGAGAGCCTTCGGGTTCAGGCTATGCTGCGACTGGTAAAAGAGATAATATAGGTACTGGATATCCAGCACCACCAGCCGTTTGTTACGGAGGGAGAGGAGTAGGCGGTTATGGAGTGCCAGTGGCACAAACTATGGGAATGGGCGGACCAGTTAGTCCGGTTTCGTCCGACGGGATTGGTAATGAAAATTCGGGTGGTCAATTTGGACTTGACATGAGTGGCTTAAGAGGAAGAAAGAGGATGGGTGATGGTCCTGTTGAAAGGGTAGTGGAGAGAAGGCAGAGGAGGATGATTAAGAATAGAGAGTCAGCAGCAAGATCTAGAGCCAGAAAACAGGCATACACAGTTGAATTAGAAGCAGAACTGAACCAGTTAAGAGAAGAGAATTCTCAACTGAAACAAGCACTGGCCGAACTCGAGCTGAGAAGAAGACAGCAGTGTTTAGAGGAAACAAACACGACGGTTCAAACCAAAGCTCAGAAAGCAAGAGAGAAACTGAGAGGCTTAAGAAGGAATACAAGTTGTCATCTGTGA 1251 0.4716 MMVREGEMNWQQGEVESLQREEEAIRNDVNNVMSSSLGRQSSSIYSLTLDEFQHSLCESGKNFGSMNMDEFLSSIWNAEENQQQGASNNNNNLSVIQKGISKQASLPRQNSLSIPAPLCRKTVEQVWSEIHREQQQQQNLHHSNVAHNTESTPRQPTFGEMTLEDFLVKAGVVREQQSAMQVPIVPPAVSSHRPQQHYTAMYPNNTATMAQAAPFAIGGGGGNVVVPTYQAVAQGGGAIGEPSGSGYAATGKRDNIGTGYPAPPAVCYGGRGVGGYGVPVAQTMGMGGPVSPVSSDGIGNENSGGQFGLDMSGLRGRKRMGDGPVERVVERRQRRMIKNRESAARSRARKQAYTVELEAELNQLREENSQLKQALAELELRRRQQCLEETNTTVQTKAQKAREKLRGLRRNTSCHL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05744 416 FunFam protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 329 385 - -
Vivi6g05744 416 Coils Coil 391 411 - -
Vivi6g05744 416 Gene3D - 329 384 - -
Vivi6g05744 416 Pfam bZIP transcription factor 331 379 IPR004827 GO:0003700|GO:0006355
Vivi6g05744 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 329 379 IPR004827 GO:0003700|GO:0006355
Vivi6g05744 416 SUPERFAMILY Leucine zipper domain 331 379 IPR046347 GO:0003700|GO:0006355
Vivi6g05744 416 CDD bZIP_plant_BZIP46 336 385 - -
Vivi6g05744 416 SMART brlzneu 326 393 IPR004827 GO:0003700|GO:0006355
Vivi6g05744 416 Coils Coil 347 388 - -
Vivi6g05744 416 MobiDBLite consensus disorder prediction 397 416 - -
Vivi6g05744 416 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 389 IPR043452 GO:0003700|GO:0045893
Vivi6g05744 416 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 334 349 IPR004827 GO:0003700|GO:0006355
Vivi6g05744 416 MobiDBLite consensus disorder prediction 134 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05744 Vivi-Chr6 163907203 163911136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05744 35 386 bZIP Transcription Factor Family AT2G36270 50.245 8.41e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi6g05744 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05744 K14432 - gmx:100790948 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05744 6 163907203 163911136 Vivi6g05744 6 163907203 163911136 ECH