Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05740 ATGAGTTTGGATACTGTGAGAATGGCAACGTCTTTTGCACCTTTGAGTTCTAGAAATTCAGCAGGAGTGTTGGCGGTTAATGGTGGAAGAAAATTGTTACAGAATCATCACATTCACATTAGCAAACCCTGTTTTTTCAAATTTCAAGAAAACAAGTGTAGATTTTCGAGCGGTAACAGGTTTCAAATGAAGTCGATACCGAATTCGCACAGTATCAATCACTATCATCATAGCAAAGACCCTTTTTTAGATCTTCATCCCGAAGTTTCAATGCTTAGAGGTGAAGGAAGTAATCCTACTAGACAGAGAAAGGATGCGTTCGGTGGAGATGTGGCAGAAAGCTTAGAAGATATTTCTATTCCGAGTAATTACAATGAAGCGAAGATTAAAGTTATTGGTGTTGGTGGTGGTGGATCGAATGCGGTGAACCGTATGATTGAGAGTTCCATTAACGGTGTGGAGTTTTGGATTGTTAATACTGATGTTCAGGCTATGAGAATGTCGCCTGTCAATTCTGAGAACCAATTGCCAATTGGTCAGGAGCTTACACGGGGTCTTGGTGCTGGTGGTAATCCGGAGATTGGTATGAATGCTGCCAAAGAAAGCACAGAATCAATACAAGAGGCGGTTTATGGAGCTGACATGGTCTTTGTTACTGCTGGAATGGGTGGAGGAACTGGCACCGGTGCAGCTCCAGTTATTGCTGGTATCACAAAGTCAATGGGTATTCTAACTGTTGGTATTGTCACAACCCCTTTCTCATTTGAAGGACGGAGAAGGGCAGTTCAAGCACAAGAAGGAATTGCAGCCTTAAGAGATAATGTTGATACCCTGATAGTTATTCCAAATGACAAGTTGCTGACTGCAGTTTCTCAGTTAACCCCTGCAACTGAAGCATTCAATTTTGCTGATGATATTCTTCGACAAGGTGTTCGTGGCATTTCTGATATTATTACGATACCTGGATTGGTGAATGTCGACTTTGCCGATGTTAGAGCTATAATGGCCAATGCAGGTTCTTCACTTATGGGGATAGGAACTGCAACTGGGAAAACACGGGCCAGAGATGCTGCATTAAATGCTATCCAGTCGCCCTTACTAGATATTGGTATTGAGAGGGCCACTGGAATTGTATGGAATATAACTGGTGGAAGTGATCTGACATTGTTTGAGGTAAATGCTGCAGCAGAAGTTATATATGATCTTGTGGACCCTACGGCTAATTTAATATTTGGAGCAGTAATAGATCCATCGCTCAGTGGTCAAGTGAGCATAACATTGATTGCTACGGGATTCAAGCGTCAAGATGAAAGTGGAGGGGGACCCGGGCAGGCCAGTCAACGAGCTTCCACTTCCACTGATGGCGGTTTGGTTGTGATCCCAGAATTCTTAAAGAAGAAATGGCGCTCAGGCCCAAGAGCTTAA 1425 0.4309 MSLDTVRMATSFAPLSSRNSAGVLAVNGGRKLLQNHHIHISKPCFFKFQENKCRFSSGNRFQMKSIPNSHSINHYHHSKDPFLDLHPEVSMLRGEGSNPTRQRKDAFGGDVAESLEDISIPSNYNEAKIKVIGVGGGGSNAVNRMIESSINGVEFWIVNTDVQAMRMSPVNSENQLPIGQELTRGLGAGGNPEIGMNAAKESTESIQEAVYGADMVFVTAGMGGGTGTGAAPVIAGITKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRDNVDTLIVIPNDKLLTAVSQLTPATEAFNFADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQDESGGGPGQASQRASTSTDGGLVVIPEFLKKKWRSGPRA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05740 474 Pfam Tubulin/FtsZ family, GTPase domain 128 289 IPR003008 GO:0005525
Vivi6g05740 474 MobiDBLite consensus disorder prediction 434 457 - -
Vivi6g05740 474 Hamap Cell division protein FtsZ [ftsZ]. 124 439 IPR000158 GO:0003924|GO:0005525
Vivi6g05740 474 Gene3D Tubulin/FtsZ, GTPase domain 118 337 IPR036525 -
Vivi6g05740 474 SMART Tubulin_C_4 324 441 IPR018316 -
Vivi6g05740 474 SMART Tubulin_4 128 322 IPR003008 GO:0005525
Vivi6g05740 474 FunFam Cell division protein FtsZ 120 337 - -
Vivi6g05740 474 NCBIfam cell division protein FtsZ 122 439 IPR000158 GO:0003924|GO:0005525
Vivi6g05740 474 MobiDBLite consensus disorder prediction 440 454 - -
Vivi6g05740 474 Gene3D - 338 440 IPR037103 -
Vivi6g05740 474 SUPERFAMILY Tubulin nucleotide-binding domain-like 127 325 IPR036525 -
Vivi6g05740 474 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 90 440 IPR045061 GO:0003924|GO:0005525
Vivi6g05740 474 Pfam FtsZ family, C-terminal domain 339 433 IPR024757 -
Vivi6g05740 474 SUPERFAMILY Tubulin C-terminal domain-like 321 435 IPR008280 -
Vivi6g05740 474 FunFam Cell division protein ftsZ, putative 338 446 - -
Vivi6g05740 474 ProSitePatterns FtsZ protein signature 2. 214 235 IPR020805 GO:0005525
Vivi6g05740 474 PRINTS Cell division protein FtsZ signature 243 264 IPR003008 GO:0005525
Vivi6g05740 474 PRINTS Cell division protein FtsZ signature 329 350 IPR003008 GO:0005525
Vivi6g05740 474 PRINTS Cell division protein FtsZ signature 215 235 IPR003008 GO:0005525
Vivi6g05740 474 PRINTS Cell division protein FtsZ signature 306 328 IPR003008 GO:0005525
Vivi6g05740 474 CDD FtsZ_type1 139 431 IPR000158 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05740 Vivi-Chr6 163865763 163874186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05740 218 426 PP2C-type Phosphatase Gene Family AT1G75010 22.273 4.20e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05740 K03531 - gmx:100793382 690.649