Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05712 ATGTTAGAGAAAAAGATTGTATCACTTAAGAAACTAGTGAAAAAGGTGAAGGTTGTAGTTAGAGTTGACCGCGACACTGCGAATAATAAGTTATTGAAGGAATATGAAGAAGAAGAAGAAAGAAGACATCCAATTGTCAAGAAAAGTGGTGTTTTTGCACTATATGTTGGAGAGGAACGACAAAGGTATGTTGTTCCAACTAGCTATCTTTGTCATCCCTTATTTAAGATGTTGTTGGAGAAAGCATACAATGAATTTGGGTTTCAACAAAGGAATGGTTTGGTTGTTCCATGTAGTGTTTCAGCTTTTCAAGAAGTGGTTAGTGCTATCGAATGTAACAATTGTAAGTTTAACATGGAAAATATTTTTGATGAATTGATTTGA 384 0.3385 MLEKKIVSLKKLVKKVKVVVRVDRDTANNKLLKEYEEEEERRHPIVKKSGVFALYVGEERQRYVVPTSYLCHPLFKMLLEKAYNEFGFQQRNGLVVPCSVSAFQEVVSAIECNNCKFNMENIFDELI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05712 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 106 IPR003676 GO:0009733
Vivi6g05712 127 Pfam Auxin responsive protein 30 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05712 Vivi-Chr6 163460610 163461289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05712 25 113 Calmodulin-binding Proteins AT5G20810 43.820 2.69e-19 77.4