Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05709 ATGTTAGGGAAAAAGATGGTATCACTTAAGAAGCTAGCCAAAAAGGTGAAGGTTGCTAGAGCTGAACTTGACCCTGCTCATAATAAGTTATTGAAGGAATATGAGGAGGAAAAAAAGCCAAAAGCCAAAAAAAAGAGATCCAAAAAGAGAGGTGCTTTTGCACTATATGTTGGGGAAGAACGAAAGAGATACGTGGTTCCAATCTCTTACCTTCGTCATCCATTATTCAAGATGTTGTTGGAGAAATCATACAAGGAATTTGGGTTTCAACAGAGATATGGTTTGGTAGTTCCATGTAGTGTTTCAGCTTTTCAAGAAGTGGTTAATGCTATTAAATGTAAGAATTGTAAGTTTGACATGACAAATATTTTCGATGAATTGATTTGA 387 0.3566 MLGKKMVSLKKLAKKVKVARAELDPAHNKLLKEYEEEKKPKAKKKRSKKRGAFALYVGEERKRYVVPISYLRHPLFKMLLEKSYKEFGFQQRYGLVVPCSVSAFQEVVNAIKCKNCKFDMTNIFDELI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05709 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 107 IPR003676 GO:0009733
Vivi6g05709 128 Pfam Auxin responsive protein 14 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05709 Vivi-Chr6 163439605 163439991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05709 17 104 Calmodulin-binding Proteins AT5G20810 41.935 1.31e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05709 K14488 - gmx:100776885 125.176