Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05667 ATGATGAAGAAAAAAACACTGAACCTCTCTTCTCTTCTCAAAAACACAGACCTCAAATATTCATCTTCATGGCCATGGCCTTATTGTCACCAACCAAAAACACTTTCTTTCAGAGCTGAAAATAGTAACCAAGATGACATTAACACCACATTCAAAATCATCAACTCAGCTTACTTGGAGCCTTCTGAATCTCTCTCTCCAAAAGCTTCTTCTCTTGATGAATCCTCAGGAAAAACCGATTCGACAGAACCCGTTATTCGCGGGTTACCGTCTGATCGGTTTTTCTTCGAGCCGGATGAGACTAACTCCATTTTAGAAGCTAATAATAAAGCTGCTGTGCATAGTGAAAGTGAAGCTACTCAAAGTTTACCATTCAAAGATAGTGTTGTGTTGTCCATGGAATCTCAAGATCCTTATGTGGATTTTCGAAAGTCTATGGAGGAAATGGTGGAAGCTCATGATGTTAAGGATTGGGAGTGTCTTCAAGGGCTATTGTGTTGGTACTTGGAGGTCAATGAGAAGAACAATCATGGCTATATTGTTGGTGCTTTTGTTGATTTATTGGTTGGTCTTGCATTTGCTTCGACTTCATCGTCGTTTTCTTCTTCGTCGTCTTCGTCTTCTCGTTCTCCTTTTTCTCCTTTATCCTTTTATAGTTCTTCTTTGTCTTCCTCTTATTGCACTCGGTGTGCTTCGTGTTCCGCGGCTCGCGAAGAAGAGATAGATACTCCTAGTTCTTCTTTGTTGTTAGAACAAGTTAGAGAGGAGACAGATGACGAAGATGAAGTAGAAGCTTCAGTAACTGAAGCTTCAATTTCATCGCCGTCATCATCAAGTAGTCATTGA 846 0.4043 MMKKKTLNLSSLLKNTDLKYSSSWPWPYCHQPKTLSFRAENSNQDDINTTFKIINSAYLEPSESLSPKASSLDESSGKTDSTEPVIRGLPSDRFFFEPDETNSILEANNKAAVHSESEATQSLPFKDSVVLSMESQDPYVDFRKSMEEMVEAHDVKDWECLQGLLCWYLEVNEKNNHGYIVGAFVDLLVGLAFASTSSSFSSSSSSSSRSPFSPLSFYSSSLSSSYCTRCASCSAAREEEIDTPSSSLLLEQVREETDDEDEVEASVTEASISSPSSSSSH 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05667 281 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 60 191 IPR038933 GO:0045892
Vivi6g05667 281 MobiDBLite consensus disorder prediction 63 82 - -
Vivi6g05667 281 MobiDBLite consensus disorder prediction 237 281 - -
Vivi6g05667 281 Pfam Transcriptional repressor, ovate 135 191 IPR006458 -
Vivi6g05667 281 NCBIfam uncharacterized plant-specific domain TIGR01568 129 192 IPR006458 -
Vivi6g05667 281 MobiDBLite consensus disorder prediction 63 85 - -
Vivi6g05667 281 ProSiteProfiles OVATE domain profile. 131 190 IPR006458 -
Vivi6g05667 281 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05667 Vivi-Chr6 162954226 162955826 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi6g05667 Ovate 6.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05667 - - vvo:131613062 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05667 6 162954226 162955826 Vivi1g03511 1 74983622 74984612 ECH
Vivi6g05667 6 162954226 162955826 Vivi6g05667 6 162954226 162955826 ECH