Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05666 ATGTCTAGCTCCAGAAAGAAGGTTCATCTGAACACTGTCTCTGTCAAACTAGGCTGTGGAAGCTGCAGAAGACTTAAACTAAGCAACATCTTCAACCCAAAACCCAAACCCAAAAACCCCACTTACCAAAAACACAAACTTTACAACAACAACCACTACTCTTCCTCTTCCTCAGGTCCTTGGAATGAAGACAAATATGATACCACAAGCACCACAAACACAACCAACACTAACACTGCCACAACATTCTCACCTCTCTACTCCTCCAACCTCTCTGATACAGAAACCTATGCCAAGGACCAGAGAAGAGTAGGAGGTTTAGGAAGAGGCGGAGGAGGAGAAGGTGTGGCTGTTGAGAAGGACTCTGAAGACCCTTATCTTGATTTCCGACACTCCATGCTGCAAATGATACTGGAGAATGAGATATACTCTAAGGATGATCTTAGAGAGCTTCTCAACTGTTTTCTTCAGCTGAATGCTCCTTATCATCATGGTGTTATTGTGAGAGCTTTTACTGAGATTTGGAATGGTGTTTCTGATAAGAGGGGTGGCTCACATAGGGTTCATGCGAACCGTACCCGTAAGCCACGTGAATATTAA 600 0.4383 MSSSRKKVHLNTVSVKLGCGSCRRLKLSNIFNPKPKPKNPTYQKHKLYNNNHYSSSSSGPWNEDKYDTTSTTNTTNTNTATTFSPLYSSNLSDTETYAKDQRRVGGLGRGGGGEGVAVEKDSEDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNAPYHHGVIVRAFTEIWNGVSDKRGGSHRVHANRTRKPREY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05666 199 ProSiteProfiles OVATE domain profile. 118 177 IPR006458 -
Vivi6g05666 199 MobiDBLite consensus disorder prediction 43 80 - -
Vivi6g05666 199 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 46 180 IPR038933 GO:0045892
Vivi6g05666 199 Pfam Transcriptional repressor, ovate 122 177 IPR006458 -
Vivi6g05666 199 MobiDBLite consensus disorder prediction 29 80 - -
Vivi6g05666 199 NCBIfam uncharacterized plant-specific domain TIGR01568 116 176 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05666 Vivi-Chr6 162882596 162883919 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vivi6g05666 Ovate 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05666 - - mtr:25499452 287.345