Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05652 ATGTACGAGAAACAACAACTCAACGGAGCCTACTACGGCCCTTCAATCCCCCCACAAAGAACCCTCCACCGCCCCTCCCGCGGCGGCGGTCTCGGCTGCTGCTGCGGCTGTCTCTTCAACCTCATCTTCAAACTAATCCTCACCGTCATAATCATCATCGGAATCGCCATCTTCCTCTTCTGGCTCATCGTTCGTCCCAACGTAGTCAAAGTCCACGTCACCCAAGCTTCCCTCACGCAATTCAACTACACAAACAACAACCTCAACTACGATCTCTCTCTCAACATGACAATCCGCAACCCCAACAAACGACTTGGTATCTACTACGATTACATCGAAGCTAGAGCCTTGTACCATGATGCTAGGGTTGACTCGGTTTTTCTTGATCCTTTTTATCAAGGACATAAAACAACTAACACGTTGAACCCTACGTTTAAGGGTTCGAAGGTGGTGGTTCTTAACAGTGATCAGAGTTCGGATTTGAGTAAAGAGAAGGATTCTAAGGTTTATGAGATTGATGTGAAGATTTATCTTAGGATTAGGTTTAAGCTGGGAGTGCTGAAGACGAGGAGGATTAAGCCTAAGGTTACTTGTGAGTTGCGTGTTCCTTTGAATTCTGACGGTGGTACAACGACGGTGGACGGTGGTTTTCAGACCACCAAGTGTGATTGGGATCGTTGA 681 0.4714 MYEKQQLNGAYYGPSIPPQRTLHRPSRGGGLGCCCGCLFNLIFKLILTVIIIIGIAIFLFWLIVRPNVVKVHVTQASLTQFNYTNNNLNYDLSLNMTIRNPNKRLGIYYDYIEARALYHDARVDSVFLDPFYQGHKTTNTLNPTFKGSKVVVLNSDQSSDLSKEKDSKVYEIDVKIYLRIRFKLGVLKTRRIKPKVTCELRVPLNSDGGTTTVDGGFQTTKCDWDR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05652 226 PANTHER OS05G0367900 PROTEIN 33 205 IPR044839 GO:0098542
Vivi6g05652 226 Pfam Late embryogenesis abundant protein 96 198 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05652 Vivi-Chr6 162793876 162794979 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05652 63 209 SNARE and Associated Proteins AT1G32270 39.869 1.17e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05652 - - gmx:100793187 311.612