Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05651 ATGGCAGATAACAAGCAGCCACAATTGAACGGTGCATACTACGGCCCCGCCATTCCACCACCAGCACAACCCCATCCATACCACCAACGAAGCAGGAGCTGTTGTTGCTGTCTCTTCAGTTTCTTCTGGAAGGTTCTTCTCACGCTGATCGTTCTCGCTGGTCTCGCAGTCCTTATCTTCTATCTGGTTGTTCAGCCCCGCTCCTTCAAATTCTATGTCACGGAAGCCAATCTAACTGAATTCGACTACAAAAACAACACGCTACACTACAATATGGCTCTCAACTTCACAGCACGCAACCCTAACAAAAAACTCAGCATCTACTACGATAAAGTTGAGGCTCTCGCGTTCTATGAAGGCTCAAGGCTTACTAATAATGTTGATGTGATCACATTCAAGAATTCGTTTCGCCAATATAAGAAGAGCAGTGATCCCATGAGCGTTGTTTTCTCAGGACAGAAACTGTTGGTGCTCGACAATGATCAAGTCTCTGAGTTCAACGAAGATAAGAGTGTTGAGGTTTATGATATATATGTGAAACTCTACTTCAGGATTAGATTCAGACTTGGAGATTTGATATCTGGTGATTACAAGCCCAAGGTGAAATGTGATTTCAAAGTCCCTTTGAATTCTAACAAGACCGCTGCTGCAACGTTTGTACCCACCAAGTGCGATGTTGATTTCTACTGA 690 0.4391 MADNKQPQLNGAYYGPAIPPPAQPHPYHQRSRSCCCCLFSFFWKVLLTLIVLAGLAVLIFYLVVQPRSFKFYVTEANLTEFDYKNNTLHYNMALNFTARNPNKKLSIYYDKVEALAFYEGSRLTNNVDVITFKNSFRQYKKSSDPMSVVFSGQKLLVLDNDQVSEFNEDKSVEVYDIYVKLYFRIRFRLGDLISGDYKPKVKCDFKVPLNSNKTAAATFVPTKCDVDFY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05651 229 PANTHER OS05G0367900 PROTEIN 32 215 IPR044839 GO:0098542
Vivi6g05651 229 Pfam Late embryogenesis abundant protein 96 198 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05651 Vivi-Chr6 162770897 162771881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05651 63 216 SNARE and Associated Proteins AT1G32270 34.375 6.08e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05651 - - gmx:100795302 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05651 6 162770897 162771881 Vivi1g07335 1 184604504 184605552 PCT