Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05650 ATGGCAGATAACAAGCAGCCACAATTGAACGGAGCATACTACGGCCCTGCCATTCCACCACCAGCACAACCCCGTCCATACCACCGCAGAAGCCGAAGCTGTTGTTGCTGTCTGTTCAGTTTCTTCTGGAAGCTTCTTCTCACACTCATCATTCTTGCTGGTCTCGCCGTCCTTATCTTCTATCTCGTTGTTCAGCCCCGCTCCTTCAAATTCTATGTCACAGAAGCCAATCTAACTGAATTCGACTACAAAAACAACACGCTACACTACAATATGGCTCTCAACTTCACAGCACGCAACCCTAACAAAAAACTCAGCATCTACTACGACAAAGTTGAGGCTCAAGCATTCTATGAAGGCTCAAGGCTTACTAACAATGTTGATGTGATCACATTCAAGAATTCGTTTCGCCAATATAAGAAGAGCAGTGACCCCATGAGCGTTGTTTTCTCAGGACAGAACCTGTTGATGCTCGACAATGATCAAGTCTCTGAGTTCAACGAAGATAAGAGTGCTGAGGTTTATGATATCTATGTGAAACTCTACTTCAGGATTAGATTCAGACTTGGAGATTTGATATCAGGTCATTACAAGCCCAAGGTGAAATGTGATTTCAAAGTCCCTTTGAATTCTAACAAGACCGCTGCTGCAACGTTTGTGCCCACCAAGTGCGATGTTGATTTCTACTGA 690 0.442 MADNKQPQLNGAYYGPAIPPPAQPRPYHRRSRSCCCCLFSFFWKLLLTLIILAGLAVLIFYLVVQPRSFKFYVTEANLTEFDYKNNTLHYNMALNFTARNPNKKLSIYYDKVEAQAFYEGSRLTNNVDVITFKNSFRQYKKSSDPMSVVFSGQNLLMLDNDQVSEFNEDKSAEVYDIYVKLYFRIRFRLGDLISGHYKPKVKCDFKVPLNSNKTAAATFVPTKCDVDFY 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05650 229 PANTHER OS05G0367900 PROTEIN 32 215 IPR044839 GO:0098542
Vivi6g05650 229 Pfam Late embryogenesis abundant protein 96 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05650 Vivi-Chr6 162760577 162761543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05650 63 216 SNARE and Associated Proteins AT1G32270 34.375 4.79e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05650 - - gmx:100795302 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05650 6 162760577 162761543 Vivi1g07338 1 184783088 184783702 PCT