Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05649 ATGGCCGATAACCAACCCCAATTGAACGATTCTTACTATGGACCTGCAATTCCAGCTACACGAGGACAATCCAACAACCGCTACAACAGTGGTAGTAGCGGTTGTTGCACTCTCTTAAGCTTTTTATGGAAACTTCTAGTTGCACTTATTGTCCTCTTCGGTCTCATAATCCTTATCTTCTATCTCATTGTTCAACCCCGTCCCTTCAAATTCTATGTCACCAAAGCCCAACTAACTCAATTCGACTACACAAACAACACACTACACTATAACATGGTGCTCAACTTTACAGCCCATAACCCAAATAAAAAGCTCAGCATTTACTATGACAGAGTTGAGGCTCAAACATTCTATGAAGGGTCAAGGTTTTCTAATGTTGACGTGATCACTCACATGAACTCGTTTCGCCAATACAAGAAAGGCAGTGACCCCATGAGTGGAGTTTTCGCAGGACAAAAGTTGTTGATGCTCGACAATGATCAAGTGTCTGAATTCAACAAAGACAAGAGTGTTGGAGTTTATAATATCAAATTGAAACTCTACTTTACGATTAGATTCAGACTAGGAGACTCCATATCCAGAAAGTACAAACCTAGGGTGAAGTGCGACCTCACTGTTCCTTTGAGCAACAACAATGGAACTGGATTTACCTTTATTCGACTTATACCCACCAAGTGCGATGTTGAGTTCTAG 693 0.4113 MADNQPQLNDSYYGPAIPATRGQSNNRYNSGSSGCCTLLSFLWKLLVALIVLFGLIILIFYLIVQPRPFKFYVTKAQLTQFDYTNNTLHYNMVLNFTAHNPNKKLSIYYDRVEAQTFYEGSRFSNVDVITHMNSFRQYKKGSDPMSGVFAGQKLLMLDNDQVSEFNKDKSVGVYNIKLKLYFTIRFRLGDSISRKYKPRVKCDLTVPLSNNNGTGFTFIRLIPTKCDVEF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05649 230 Pfam Late embryogenesis abundant protein 96 200 IPR004864 -
Vivi6g05649 230 PANTHER OS05G0367900 PROTEIN 34 208 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05649 Vivi-Chr6 162748629 162749321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05649 63 215 SNARE and Associated Proteins AT1G32270 33.333 1.67e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05649 - - gmx:100807701 293.508