Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05648 ATGGCCGATAACCAACCTCAGTTGAACGACTCTTACTATGGACCTGCAATTCCTGCTGCACGAGGGCGATCCAGCAACCGCAACAACCGTGGCCGTAGCGGTTGTTGTTCTCTCTTCAGCTTTTTATGGAAACTTCTTGTTGCACTTATTGTCCTCTCCGGTCTCGTAATCCTTATCTTCTATCTCATTGTTCAACCCCGCACCTTCAAATTCTATGTCACGAAAGCCGAGTTAACCCAATTTGACTATACCAACAGCACACTACACTACAACATGGTGCTCAATTTCACTGCCCGTAATCCAAACAAAAAACTTGGTATCTATTACGATAAAGTTGAGGCTCAAGCATTCTATGAAGGGGCAAGGTTTGCGAATGTCGATGTGATCACACACGTGAACTCTTTCCGCCAAGACAAAAAAAGCAGTGACCCTATGAGTGGTGTTTTCTCAGGACAACAGTTGTTGATGCTCCATAGTGATCAAGTGTCTGAATTCAACAAAGACAAGAGTGTTGGAGTTTATAATATCAAAGTGAAACTTTACTTTACGATTAGATTCAGACTTGGGGACTCCATATCCAGAAAGTACAAACCTAAGGTCAAGTGCGACCTCACTGTTCCTTTGAGCAACAACAATGGAACTGGATTTACCTTTATACGACTTATACCCACTAAGTGCGATGTTGAGTTCTAG 693 0.4286 MADNQPQLNDSYYGPAIPAARGRSSNRNNRGRSGCCSLFSFLWKLLVALIVLSGLVILIFYLIVQPRTFKFYVTKAELTQFDYTNSTLHYNMVLNFTARNPNKKLGIYYDKVEAQAFYEGARFANVDVITHVNSFRQDKKSSDPMSGVFSGQQLLMLHSDQVSEFNKDKSVGVYNIKVKLYFTIRFRLGDSISRKYKPKVKCDLTVPLSNNNGTGFTFIRLIPTKCDVEF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05648 230 PANTHER OS05G0367900 PROTEIN 34 208 IPR044839 GO:0098542
Vivi6g05648 230 MobiDBLite consensus disorder prediction 1 30 - -
Vivi6g05648 230 Pfam Late embryogenesis abundant protein 96 202 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05648 Vivi-Chr6 162728892 162729716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05648 63 215 SNARE and Associated Proteins AT1G32270 33.974 2.88e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05648 - - gmx:100807701 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05648 6 162728892 162729716 Vivi6g05648 6 162728892 162729716 ECH
Vivi6g05648 6 162728892 162729716 Vivi1g07340 1 184993403 184994300 PCT