Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05595 ATGGAGCAGGTGACAACCCTTTGTGATCTTGAGGCATGTGCGGTTGTGTTTGGCCCAGGAGATACAACACCTTTAATGTGGCCATCTCGTGCTGTAGCTGAAACCCTAATACACAAATTTGAGTCGATGTCAGAATTTACCCGATCCAAAAATGTAACTGACCAAGTGTCTTTTTTGAAGGAAAAAGGTGAAAAACTTCAAGCAACCCTTGACAAGATGAAGGAAGATAATGAAGAAACACTAATGGGTTCTTACATGTATCAAATTGAAAGCGGGGGTAAGGTTTTGAGTGATTTTGAACCTAGTGAGTTGAATCGTTTGATCAATTTTATGTTGAAAAAGTATAAGATTTTTAGTCAAAGACTAGGGTATATTGAAGAGGGTGTGTCCCATCTTAATAGTCCTTTAGAGAATAAGAATGGGGTAGATTTTGAGATAAACACAAATAATCAAAGTTTGAATCAACAACCATTGTTAGATTTAGATAACCAATGCGATCGAATGATTATTGATTTTGATAACAATGTTGGAAGTAGCATGAGGCCATCACCACATGAAAATCTTAATAATGGTGGTAACATGTTTGAAGTTTTTGGAGGCTTCAATAACAATGGGGGTAACAACATTGATAGAAGCATGGTGATACAACCATATTCAAATCCTAGTGTTGGAGTTGGTGAGGTGTTTCCTCAAGGAGTATTTGAGGGTTTTAATGGTGGAAGTACTTCGAGAGTGTTTGATGAAGGAAAATATGGAGGTTTCAATGGCGAAAAATACTCGGGTTCTGCGGCATTTCCTCCTAACATGCTTGGAGTTTCCAATGGTGAAAATTATCAATCAAATTTATTTCCTCAAGGTGATTTGCAAGGTAGTTATGGTATCCCTACCAATGATGGAAGTGGCATGACTATGCCAATGCCTTTGAACATCAATGAAGACAATAATAATGGAAGACATATGAGAAGTTTCAATGCAAACTTTGCTGATGGAAACAATTTCAACAATAGATTTCTTTAA 1017 0.3687 MEQVTTLCDLEACAVVFGPGDTTPLMWPSRAVAETLIHKFESMSEFTRSKNVTDQVSFLKEKGEKLQATLDKMKEDNEETLMGSYMYQIESGGKVLSDFEPSELNRLINFMLKKYKIFSQRLGYIEEGVSHLNSPLENKNGVDFEINTNNQSLNQQPLLDLDNQCDRMIIDFDNNVGSSMRPSPHENLNNGGNMFEVFGGFNNNGGNNIDRSMVIQPYSNPSVGVGEVFPQGVFEGFNGGSTSRVFDEGKYGGFNGEKYSGSAAFPPNMLGVSNGENYQSNLFPQGDLQGSYGIPTNDGSGMTMPMPLNINEDNNNGRHMRSFNANFADGNNFNNRFL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05595 338 SUPERFAMILY SRF-like 4 62 IPR036879 GO:0003677|GO:0046983
Vivi6g05595 338 Coils Coil 56 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05595 Vivi-Chr6 161841911 161842927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05595 1 115 Type I MADS-box Gene Family AT5G48670 30.435 7.35e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05595 - - vvo:131615195 633.639