Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05558 ATGGGTTCCCTTCCACACGTAGTAGAAGACTGCATGGGCTTCCTCAAGCTCTACAGCGACGGTTCCGTTCACCGTTCAAACAATTTCAAATTCCATGTTTCCCAAATCCAAGACAACACGGTATCCTTCAAAGACTGCGTCTTCGACAAAAAATTCAACCTCTCTCTTCGCCTTTACAAACCCAACACCAACAACAACAACAGTAATAACAAAAACAAGCTTCCTATGATTATGTTCCTTCACGGAGGAGGATTCTGTTTCGGCTCACGCACGTGGCCGCATATGCATAACTGTTGTGTACGTCTTGCCACTGGACTCCAAGCGATGGTTGTCGCGCCGGACTATCGTCTCGCGCCAGAGCACCGTCTTCCGGCGGCGGTTGATGACGCTGTTGAGGCGGTGAGGTGGATTCAGAGGCAAGGGTTGAGCTTAAAAGAGGAGGAGAATAATTGTGGAGAGGCGTGGTTGAGGGATAACGTTGACTTTGACCGTGTGTTTATAGTGGGTGACTCTTCTGGCGGGAACATTGCGCATCAGCTAGCGGTTCGGTTTGGGTCGGATCGAACCGCTATTGAACCGGTTCGGATAAGAGGTTATGTTCTGTTGGCGCCGTTTTTTGGCGGGGAGGTAAGAACCGAGTCTGAGGAAGGTCCTGCTGAACAAACGTTGAATCTTGACTTGCTTGACAGATTTTGGAGGCTATCTATGCCTGTTGGAGAGACCAGCAGAGATAATCCATTGGCTAATCCATTTGGACCTAATAGTCCAAATCTTGAAAAAATGAAGCTTGATTCTATTTTGGTGATAGTTGGTGGAAATGAATTGCTTAAAGATAGGGCTGCAAACTATGCTACAAAATTGAAAGGAATGGGAAAAGACATTAAATACATTGAATTTGAAGGGTGTGAACATGGATTTTTCACACATGATTCATATTCAGAAATTGCAAAAGAAGTTATCCATATCCTTAAACGATTCATGCTTAAATCATCTACTTAG 999 0.4505 MGSLPHVVEDCMGFLKLYSDGSVHRSNNFKFHVSQIQDNTVSFKDCVFDKKFNLSLRLYKPNTNNNNSNNKNKLPMIMFLHGGGFCFGSRTWPHMHNCCVRLATGLQAMVVAPDYRLAPEHRLPAAVDDAVEAVRWIQRQGLSLKEEENNCGEAWLRDNVDFDRVFIVGDSSGGNIAHQLAVRFGSDRTAIEPVRIRGYVLLAPFFGGEVRTESEEGPAEQTLNLDLLDRFWRLSMPVGETSRDNPLANPFGPNSPNLEKMKLDSILVIVGGNELLKDRAANYATKLKGMGKDIKYIEFEGCEHGFFTHDSYSEIAKEVIHILKRFMLKSST 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05558 332 Pfam alpha/beta hydrolase fold 77 307 IPR013094 GO:0016787
Vivi6g05558 332 PANTHER ARYLACETAMIDE DEACETYLASE 11 307 - -
Vivi6g05558 332 SUPERFAMILY alpha/beta-Hydrolases 4 327 IPR029058 -
Vivi6g05558 332 Gene3D alpha/beta hydrolase 14 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05558 Vivi-Chr6 161290029 161292857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05558 7 321 Carbohydrate Esterase AT5G16080 33.750 2.11e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05558 - - gmx:100803077 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05558 6 161290029 161292857 Vivi6g05558 6 161290029 161292857 ECH