Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05523 ATGGCTGAAACCGTCGCTGCTGTCCCCGTTCCCGTCGCCGTCGAAGTCGATCCAAATCAAATCGAAGTCAAGCTCTTCAACAGATGGAGCTTCGACGATGTTCAGCTTAGTGATGTGTCTCTTTCTGATTACATTGGAGTTCAATCATCCAAGCATGCTACATATGTGCCTCACACTGCTGGTAGGTACTCAGTGAAGCGTTTTAGAAAGGCCCAATGTCCCATTGTTGAGAGGCTCACCAACTCTCTCATGATGCACGGGAGAAACAATGGAAAGAAGCTCAAGGCTGTTGGGATTATTAAGCATGCCATGGAGATTATTCATTTGCTAACTGATCAGAATCCAATTCAAGTTATCGTTGATGCTGTTGTCAACAGTGGTCCCAGAGAAGATGCAACTAGAATTGGGTCTGCTGGAGTTGTTAGGAGGCAGGCTGTTGATATCTCACCTCTTCGCAGGGTTAACCAGGCCATCTACCTTCTTACAACAGGTGCCCGTGAAGCTGCATTCAGGAACATTAAGACTATTGCTGAATGCTTAGCTGATGAACTTATCAATGCTGCCAAAGGTTCTTCCAACAGCTATGCAATCAAGAAAAAGGACGAGATAGAGAGAGTTGCCAAGGCTAATCGTTAA 636 0.456 MAETVAAVPVPVAVEVDPNQIEVKLFNRWSFDDVQLSDVSLSDYIGVQSSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLKAVGIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05523 211 CDD uS7_Eukaryote 24 211 IPR005716 GO:0003735|GO:0006412|GO:0015935
Vivi6g05523 211 FunFam 40S ribosomal protein S5 7 211 - -
Vivi6g05523 211 NCBIfam 30S ribosomal protein S7 22 211 IPR005716 GO:0003735|GO:0006412|GO:0015935
Vivi6g05523 211 Gene3D Ribosomal protein S7 domain 5 211 IPR036823 -
Vivi6g05523 211 SUPERFAMILY Ribosomal protein S7 24 211 IPR036823 -
Vivi6g05523 211 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 211 IPR000235 GO:0006412
Vivi6g05523 211 Pfam Ribosomal protein S7p/S5e 65 211 IPR023798 -
Vivi6g05523 211 ProSitePatterns Ribosomal protein S7 signature. 77 103 IPR020606 GO:0003723|GO:0003735|GO:0006412
Vivi6g05523 211 PANTHER RIBOSOMAL PROTEIN S7 3 211 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05523 Vivi-Chr6 160883719 160886780 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05523 22 211 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.105 1.33e-132 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05523 K02989 - rcu:8285751 362.073