Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05510 ATGAAGATGAGATTCTTCCTTGTAGCCTCTATGATGCTTCTCAGTTTCCTTGAGATTAGTGAAGGAGGCAGTCTCAGGAAGAATTTCTATAAGAAATCATGTCCTCAAGCTGAGGACATTGTGAAGAACATAACCCAACAACATGTTTTTTCAAGGCCTGAGCTTCCGGCCAAGTTGCTAAGATTACATTTTCATGACTGTTTTGTTAGGGGGTGTGATGCTTCGGTTTTAATAGAGTCCACTGCAAGTAACACTGCGGAGAAGGATGCTATTCCTAATTTATCGTTATCAGGCTTCGATGTGGTACAGGATATCAAAGATGCTGTGGAAGCAAAGTGTCCTGGAATTGTTTCATGTGCTGATATACTTGCACTCACTGCTAGAGATGCTGTTTCTGTCCAATTTAATAATAAACAAAAGTGGGAAGTGCTTACTGGTAGAAGAGATGGTACTGTCTCCAAAAGCTCTGAAGCACTCATCAATATCCCAGCACCTTTCCATAACATCACAACACTCGGACAAATCTTTGCTAGTAAAAAGCTTACTCTTCATGACTTGGTTGTATTATCAGGAGCACACACAATTGGAATAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAACTTCACTGGAAAAGGTGATCAAGATCCTTCTCTGAATCCAACTTATGTCGAATTCTTGAAGACCAAGTGCCAAGGTTTAAGTGATACCACCACAACGGTGGAGATGGATCCTAATAGTTCAACAGACTTTAACAGCGACTATTATCCTATCCTTCTCCAAAACAAAGGTCTATTCACATCAGATGCTACTCTTCTCACAACCAAACAGTCAAGAAACATTGTGAATGAATTGGTTTCACAAAACAAATTCTTCACTGAGTTTGCTCAGTCAATGAAGAGGATGGGAGCCATTGGTGTCCTTTCTGGTTCAGATGGAGAGATCAGGAGGAAATGCTCTATTGTTAATTAA 975 0.4021 MKMRFFLVASMMLLSFLEISEGGSLRKNFYKKSCPQAEDIVKNITQQHVFSRPELPAKLLRLHFHDCFVRGCDASVLIESTASNTAEKDAIPNLSLSGFDVVQDIKDAVEAKCPGIVSCADILALTARDAVSVQFNNKQKWEVLTGRRDGTVSKSSEALINIPAPFHNITTLGQIFASKKLTLHDLVVLSGAHTIGIGHCNLFSNRLFNFTGKGDQDPSLNPTYVEFLKTKCQGLSDTTTTVEMDPNSSTDFNSDYYPILLQNKGLFTSDATLLTTKQSRNIVNELVSQNKFFTEFAQSMKRMGAIGVLSGSDGEIRRKCSIVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05510 324 PANTHER PEROXIDASE 25-RELATED 13 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 Gene3D - 28 324 - -
Vivi6g05510 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 Gene3D Peroxidase, domain 2 163 303 - -
Vivi6g05510 324 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Vivi6g05510 324 FunFam Peroxidase 28 179 - -
Vivi6g05510 324 FunFam Peroxidase 163 303 - -
Vivi6g05510 324 Pfam Peroxidase 45 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi6g05510 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05510 Vivi-Chr6 160711869 160713318 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05510 7 324 Peroxidase AT1G05260 51.385 2.07e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05510 K00430 - mtr:25499574 561.222