Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05463 ATGGAGCTCTGGAACGGCGATTTATCGGAGCTGGAGGTTGGGAGTTCCGTCGAGTCGTTCCAGAGGTTTTTGGCTTCTCAGAGAGAACTTTTGCATAGTCAGATCGATCAGTTTCAGGAAATCGTTGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCTGCTGGTGCTCTGTCAATAAAAATCGGAAAAAGACCTAGGGATTTATTAAATCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCTATTAAAGATGCAATTAGTAAGAAAGAGTCTCGGGAGATCAGTGCTTTATTTGGTGTAACAGTAACACAGGTGCGTGATTTTTTCACTAGTCAACGTTCAAGAGTGAGGAAACTAGTTCAGTTGTCAAGGGAGAGGGCATTAAAATCTAATTCTTGTGCGGAATCTCTTGATGTACAAATGAACTCTGATCCTGTGAGATCAATAAATCCAGCTCCCTTAAACTCAGATGGTGCCACCAATGTGGAAGAAGCATCCTGTTCAACACAGGAAGCTGCTCTTTCTGACCTGGACGACCTAGATAAACAATTTGTCGAGAATATTTTTGGACTAATGCAGAAAGAGGAAACATTTTGTGGACAGGAGAAGTTGATGGAGTGGATTTTGTCAATACAGAACTTTTCTGTCTTGTTATGGTTTTTGACCGGAGGAGGTGCAATAACTTTAGCAAATTGGTTGACCAAAGCTGCTGTTGAAGAGCAAACGAGTGTATTGCTTCTTATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCTTCCTGCACACATATCAGCTTTATTGCAGAGTGTTAATAGACTACGGTTCTACAGGACATCAGACATATCTAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTGTTAACAAGGAACCAAGCCATAAAGAAACCCAATGGTGTTAAGCCTTCCTATGATGGTCAAAAAGAGATGATATTTTCTCAGAGTATTGGTCAAATAATCAGCCCTGAATCTTGGAGTTTTGATGTTCCTGAAGACATTCTTGCTCTCTCGAATGAATTTTCAGATAATTCCAGGAAACTGGGATCTCAATCTGTGAAATTGTTGCTGCCCAGCTCCGATGATTGTAATAAGAAACCTCCCCTTGGTGTATCTTCATCTCATTCTAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGTTCAACGAGTAGAAGTCCACAGGCGGCAAGGTCAGGGCCGGTAAGTCAAGGCCGTCCTATGTCCGCCGATGATATCCAGAAAGCAAAAATGCGTGCGTTATTTATGCAGAGTAAGCATGGGAAAACTGCTTCAAAAGAAAATAAAGAAGCTAAAATCAATAGTCTGAGTAAATCTCCGAAGGCCAGTATTGCAGTTTGCTCTTCTAAAGTTCCAGCGCCACTCAAAATTGAAGAGAAGAAGCCTCTGTTGTCTTCCTCTAAAACCACTAATAGGCTGGAAGTTTCTAATTCTAAACTGAAAACGGATTTGAAGGAACCTCTCTCGGAGAAGTGCAAGAGGGTGAAAATCTTCTGGAAAACACCAACAGAAATAATACTTAAAGATACGTGGAGAGTTGGTGCTGGTCAAAATAGCAAAGAGGTTCATATCCAGGAAAACAGAAACCGCAGGGACAAAGAAGCTATTTATCAGACAGTACAAGAGATGCCCTCTAATCCCAAGGAGCCTTGGGATATTGAAATGGACTATGACGACTCTTTGACACTGGAAATTCCTATTGAACAGCTACCAGATAGTGATGATCCAGAAATAGTAGATGCATCCAATGAAGTTGCAGCTACAACTCACGCTGCTGTTCAAGGGGCGGCCTCCTCGTCTTCAGCCAGTAATGCAGCCACTGCTGAACCTGATTTAGAGTTGCTGGCCGTACTGCTAAAAAATCCAGACTTGGTATTTGCCTTAACTTCTGGACAAATTGGCAACATCTCAAATGAGGAAACGTTGAAGCTGCTTGACATGATCAAGAGAGGCAGTGTGAACACGGGATTAAGTGAAAATGCAAATAGAAACTACGGTACTAGTGCAATGGCCCCTGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTCAAGCAATCCAAGCACGAGTGGATGCAGCATAGAAGCACCAAAGAATCCATTTACAAGGCAAAACTTAGCACCTGATAGAAGAAGTTTCCAGAGCTCTTCTTCAATTGCAACTGCCAACTTATCATCTCATATTTCAGCAACTAGTACTACAGTAAGGCAGCAACATACATTTGTTCCATTTTCGAAGCAGCTCCCTGGCACAACAGTTTCTCCATATTCACTACCTCAGGCAAATAATACTATTCATGAAAAACAACCACTTCACTCTCTTTCCTCAGTCTATGCACAAACACCATTCTCTGATAGAGGTTTAGCTATAAAGAACACAGTCACCGCCGATGTATCTCCAGTCGGTGCACATACACATGCAATACGGGCTGATGTCATAAGTAACATAAAACCCGTAGTACCTAATTCTACTATGCAAGAGGGTTTGCCTAATTCATTCCCACAACCCTTCACGTTGAACTCACCAACATCACGCTCAGCCACACAACAACAAAGACATAGTAATATGATGCCCCACCAGCCCCATTTTTCGGAACCTTCTTATCATAACCCTGTCCATCCCTATCAACCACAGTTCGATAAATCAGTTCCTGCATCAGATTACCGGAGAGTCAGGCAGGATATGCCTCCGAGTTATCATTCTCAACAAAATCATGACAACTATAACAACACGTTGGTTGGGGGATCCATGCAATCTGGTTCTTGGGATAGAAACAATCATCAAAGAGGGGGATTTGAAACATGGAGTCCGGATAATAGTCCAACTAGGAATCCTAGGTATGTTCAAGGTAGGAATCTCCCAGATTCCAGAACGAATCATGTAAGAAATAATAGACCTGAATGGTCAAGGCAGCGGGGTTCTTCTGGACATTGGAACCCTGGTAGGCATGACAACAGAAAGTGGAATGATCAGAGACGATAA 3057 0.4246 MELWNGDLSELEVGSSVESFQRFLASQRELLHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDFFTSQRSRVRKLVQLSRERALKSNSCAESLDVQMNSDPVRSINPAPLNSDGATNVEEASCSTQEAALSDLDDLDKQFVENIFGLMQKEETFCGQEKLMEWILSIQNFSVLLWFLTGGGAITLANWLTKAAVEEQTSVLLLILKVLCHLPLHKALPAHISALLQSVNRLRFYRTSDISNRARVLLSKWSKLLTRNQAIKKPNGVKPSYDGQKEMIFSQSIGQIISPESWSFDVPEDILALSNEFSDNSRKLGSQSVKLLLPSSDDCNKKPPLGVSSSHSRERRKVQLVEQPGSTSRSPQAARSGPVSQGRPMSADDIQKAKMRALFMQSKHGKTASKENKEAKINSLSKSPKASIAVCSSKVPAPLKIEEKKPLLSSSKTTNRLEVSNSKLKTDLKEPLSEKCKRVKIFWKTPTEIILKDTWRVGAGQNSKEVHIQENRNRRDKEAIYQTVQEMPSNPKEPWDIEMDYDDSLTLEIPIEQLPDSDDPEIVDASNEVAATTHAAVQGAASSSSASNAATAEPDLELLAVLLKNPDLVFALTSGQIGNISNEETLKLLDMIKRGSVNTGLSENANRNYGTSAMAPEKVEVSLPSPTPSSNPSTSGCSIEAPKNPFTRQNLAPDRRSFQSSSSIATANLSSHISATSTTVRQQHTFVPFSKQLPGTTVSPYSLPQANNTIHEKQPLHSLSSVYAQTPFSDRGLAIKNTVTADVSPVGAHTHAIRADVISNIKPVVPNSTMQEGLPNSFPQPFTLNSPTSRSATQQQRHSNMMPHQPHFSEPSYHNPVHPYQPQFDKSVPASDYRRVRQDMPPSYHSQQNHDNYNNTLVGGSMQSGSWDRNNHQRGGFETWSPDNSPTRNPRYVQGRNLPDSRTNHVRNNRPEWSRQRGSSGHWNPGRHDNRKWNDQRR 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 1002 1018 - -
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 700 743 - -
Vivi6g05463 1018 Gene3D - 68 125 - -
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 373 427 - -
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 919 1018 - -
Vivi6g05463 1018 SMART HOX_1 68 130 IPR001356 GO:0003677
Vivi6g05463 1018 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1002 - -
Vivi6g05463 1018 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 860 906 - -
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 921 982 - -
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 860 886 - -
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 401 419 - -
Vivi6g05463 1018 SUPERFAMILY Homeodomain-like 68 129 IPR009057 -
Vivi6g05463 1018 MobiDBLite consensus disorder prediction 703 743 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05463 10 730 Homeobox Transcription Factor Family AT4G02560 49.751 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05463 - - gmx:100806633 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05463 6 160204151 160220556 Vivi6g05463 6 160204151 160220556 ECH