Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05461 ATGGGTGTAGAAGAAGACGCGGTAGTTGTGAACATGGACACTGTAGAAAAGACACAATCCAGAAAGTATAAGAGAAATGATTCTCTTGAATTGGAAGCTCGAACCCCGGCTCACGCGCGTGACCCGAAAGGAGAATCAACTGCCTTAATGCTACAACTGGCGTTTCAAAGTCTCGGAATAGTTTACGGAGACATTGGAACCTCACCGTTGTATGTGTTTTCAAGCGTCTTCCCTGAGGGTATAAAGGACAACGATGATATCTTGGGTGTTTTCTCTTTAATCTTTTACACGCTCACTCTCATTCCTTTTCTCAAGTATGTGTTCTTCGTGCTAAGGGCAACGGATAACGGCGATGGTGGAACGTTTGCTTTGTATTCTCTGGTATGCCGTTACGCCAAAGTGGGACTTCTTCCGAATAAACAAATAGAGGACACAGAGGTGTCTAATTACCAGCTGAAATTGCCAAACCGCCGTGAAATGAGAGCGTCGAAGCTTAAAATTATGCTTGAGAGCAGTCACTTTATGAAGATCTTCCTCTTATCTGCTACTTTGCTGGGAACTTCCATGGTTATCGGCGACGGTGTTCTCACCCCTTGTATATCTGTATTATCCGCCGTGGGAGGGATCAAGGAAGCTGCTAGCAGTATAACTGAGAATCAAATTGTGCTGATATCAGTGATAATCTTGATTGGTCTTTTCATGGTTCAGAGATTTGGAACTGATAAAGTAGGTTACAGTTTCGCTCCCATAATCTGTATATGGTTTGCTCTCATTGCCTGTATTGGCCTGTACAATTTCATCAAGCATGATCCATTAGTTATAAAAGCGTTAAATCCAAAATACATAGTAGATTATTTCGCCAGGAATAAAACAGATGCTTGGATTTCTCTTGGTGGCATTGTCCTCTGCACAACAGGAGCTGAAGCATTATTTGCTGATGTTGGACATTTCTCAGTTCGGTCTATCCAAATAAGTATGTGTTGTGTTACTTATCCTTCTCTCATTTTGGCTTATGCTGGACAAGCCGCATTTCTTCGCAAAAACAATGATCTTGTTAGTGCCACATTCTATAAGTCCATACCAGCCTCTATGTATTGGCCAATGTTTGTGGTCGCTGTTTTGGCAGCGATTATAGCTTCTCAAGCCATGATCTCAGGGACTTTTTCTATAATCCAACAGTCTCTATCATTGGGATGTTTCCCTCGCGTGCAGATTGTGCATACATCAGAGAAGTATGAAGGACAAGTTTATATTCCAGAGGTTAATTACATCCTCATGATTGCTTGTATTGCCATCACTGTTGGTTTTAAAAACACAACACAAATTGGCAATGCCTATGGGATAGCAGTGGTGTTTGTGATGGCACTAACATCTGCTTTTCTCATACTAATCATGGTCTTGATATGGAACACTCACATAGTACTGGTCATCGCCTACGCTCTCATCATTGGTTCAGTGGAGCTTATTTATTTAAGTTCAGTTTTATACAAATTTGATCAAGGAGGTTATCTTCCTCTTGCATTTGCCTTCTTTCTAATGTTCATCATGTTTGTTTGGAACAACGTGTTTCGGAAGAAATACTGTTACGAACACGACCACAAGATTTCTCAAGAGAAACTCAGAGAGATTGCTTGTGACACAAGTTTAAGTCGATTACCTGGTCTTGGAATGTTTTACTCAGAGCTTGTTCAAGGCATTCCACCAATTTTCAGGCATTTTGTTGCGAATGTACCCGCACTTCACTCTGTACTTGTCTTTGTTTGTATCAAATCTTTGCCTATAAGTAAAGTCGCAAAAGAAGAAAGGTTTCTCTTTCGCCGAGTACAGCCTAAAGAGCTCAATGTATTCCGATGCGTAGTTAGATATGGATACACAGATGCCCGCAACGAGCAAGAGCCTTTCGAGAAGCTAATGCTTGACAGGTTAAAGGAGTTTATTGTTAATGAAAATTATTGTTCTCGACAAGATAGTGATGATGAAGCTAAAGTACAAGAGGCAGCTCAGAAAGAGATTGATATAATTGAACAAGCAGCCAGGGCTGGTGTTGTTCACTTGATGGGTGAAAATGAGGTGGTTGCTAGGAAAGGAGCTGGCATGTGGAGGAGGTTTTTGATTGATTATTCTTACAATTTTTTGAAGAAAAACTTGAGGGAGAGTGAAAGAATATTTGATATTCCTCAACAACGAATGGTCAAAGTGGGAATGACTTATGAACTATAA 2220 0.4068 MGVEEDAVVVNMDTVEKTQSRKYKRNDSLELEARTPAHARDPKGESTALMLQLAFQSLGIVYGDIGTSPLYVFSSVFPEGIKDNDDILGVFSLIFYTLTLIPFLKYVFFVLRATDNGDGGTFALYSLVCRYAKVGLLPNKQIEDTEVSNYQLKLPNRREMRASKLKIMLESSHFMKIFLLSATLLGTSMVIGDGVLTPCISVLSAVGGIKEAASSITENQIVLISVIILIGLFMVQRFGTDKVGYSFAPIICIWFALIACIGLYNFIKHDPLVIKALNPKYIVDYFARNKTDAWISLGGIVLCTTGAEALFADVGHFSVRSIQISMCCVTYPSLILAYAGQAAFLRKNNDLVSATFYKSIPASMYWPMFVVAVLAAIIASQAMISGTFSIIQQSLSLGCFPRVQIVHTSEKYEGQVYIPEVNYILMIACIAITVGFKNTTQIGNAYGIAVVFVMALTSAFLILIMVLIWNTHIVLVIAYALIIGSVELIYLSSVLYKFDQGGYLPLAFAFFLMFIMFVWNNVFRKKYCYEHDHKISQEKLREIACDTSLSRLPGLGMFYSELVQGIPPIFRHFVANVPALHSVLVFVCIKSLPISKVAKEERFLFRRVQPKELNVFRCVVRYGYTDARNEQEPFEKLMLDRLKEFIVNENYCSRQDSDDEAKVQEAAQKEIDIIEQAARAGVVHLMGENEVVARKGAGMWRRFLIDYSYNFLKKNLRESERIFDIPQQRMVKVGMTYEL 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05461 739 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 41 738 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vivi6g05461 739 Pfam K+ potassium transporter 54 626 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vivi6g05461 739 NCBIfam potassium uptake protein 53 738 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05461 Vivi-Chr6 160161513 160164487 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05461 16 739 Inorganic Solute Cotransporters AT4G13420 51.823 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05461 K03549 - qsa:O6P43_010741 1066.6