Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05435 ATGGCGATAAGAGGTAGACGAAAGGCTATTGCAATGGATCTAAGAAGTTGGATGATAGTTTCAGAAACAGGTGAATTTGTGATTGAGGATCTCGACAAACACTCCATTATGCGACGAACAGGTTTACCGGCGCGAGATCTTAGAGTTCTTGATCCAACACTTTTGTACCCTTCTTCTATTATAAGACGAGAAAAATCAATTGTTGTTAACTTAGAACACATTAAAGCCATCATCACTTCAAACCAAATGCTTATAATTAATTCTTCTAGCCCTTTCTTTATTTTGTTCCTTCAAGATCTTCAAGCGCGTATTCCTCGCTCTAATAATGTCGAAAAGCTTACATCAAATGATAACGACAATGATGATCATAAGCAATTACCTTTTGAGTTTAAAGCTCTCGAGACTTGTATTGAATCGGCATGTGCATGCCTTGAATATGAGAATCAACGATTGGAAGAGGAGGCTTACCCAGCTTTAGATGAATTGGCCTCTCAAATTAGTACTCTAAATCTTGAACGTGTAAGGCATATCAAGAATCGTTTGGTTGCACTTTCTGGTCGTGCGCATAAGGTAACACATCAACTAGAAAACTTGTTGGATGATGATTATGACATGGCTGAAATGTACTTGACAAGAAAATTTGATGATTCTTTAATAGACCAAACATCATTAAGAAAAGGATACAGTTTAGCTATTGATGAAGATCTCTATGACAGTGATGAATCAAATACGTTTCAATACAGATTCTATGAATCTAAGCCTGATGTTGAGGAATTAGAGATGCTTTTAGAAGCGTATTTTGCACAGATAAATGGAATTTTGCAAAGATTGTCCAGTTTAAGTGAGTATGTAGATGATACAGAGGACCACATCAACATAATGTTGGATGATAAGAGAAATCAGCTACTACAAGTATCAATAATATTCAGCACAATGAGTGTGATAGTCAATGCAGGTATTGTGGTTGTTGGATTGTTTGGCATGAATGTTCATATTGATCTCTTTGACGGCCAACCTGATCATCAATTTTGGGCTACAGTTGGTGGAACATTCTCAGGTTGTGTATTGTTATTTATTGTTTCTATTTGGTGGGGTAAAAAAAGATATATTTTGTCTCAATAA 1122 0.3592 MAIRGRRKAIAMDLRSWMIVSETGEFVIEDLDKHSIMRRTGLPARDLRVLDPTLLYPSSIIRREKSIVVNLEHIKAIITSNQMLIINSSSPFFILFLQDLQARIPRSNNVEKLTSNDNDNDDHKQLPFEFKALETCIESACACLEYENQRLEEEAYPALDELASQISTLNLERVRHIKNRLVALSGRAHKVTHQLENLLDDDYDMAEMYLTRKFDDSLIDQTSLRKGYSLAIDEDLYDSDESNTFQYRFYESKPDVEELEMLLEAYFAQINGILQRLSSLSEYVDDTEDHINIMLDDKRNQLLQVSIIFSTMSVIVNAGIVVVGLFGMNVHIDLFDGQPDHQFWATVGGTFSGCVLLFIVSIWWGKKRYILSQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05435 373 CDD Mrs2_Mfm1p-like 17 368 IPR039204 -
Vivi6g05435 373 FunFam Magnesium transporter MRS2-E 96 302 - -
Vivi6g05435 373 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8 368 IPR039204 -
Vivi6g05435 373 Gene3D Magnesium transport protein CorA, transmembrane region 91 302 - -
Vivi6g05435 373 FunFam Magnesium transporter MRS2-1 4 88 - -
Vivi6g05435 373 Gene3D - 5 89 - -
Vivi6g05435 373 Pfam CorA-like Mg2+ transporter protein 257 366 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05435 Vivi-Chr6 159871880 159873749 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05435 16 371 MRS2 Gene Family AT3G19640 42.141 9.28e-110 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05435 - K16075 gmx:100808805 463.381