Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05426 ATGTTCACAAAATTACGCCTTATGTTACTATTAATAATTGCAATATTTCTTTCACTCTCAACAAATACTAGCCAAAACCAAATGGTATATCCCAAAGAAAACATCAACAACAACAACAATAATGTTAAGGAAGCATGTAGTGTCACAAGGTACAAAAACCTATGCATCCACACACTAGCACAATTCTCCAACACTGCCGGAAGAACCCCGAGCAAATGGGCGCGTGCGGGCGTATCCGTTACAATAGGCGAAGTTAAGAATGTACAAGCATATCTTAAGAAGCTAAAGACTCGCGGGAACATGAAAGGAAGAAACAAAGTCGCGCTTTTGGATTGTATAGAGACTTTTGGCTATGCACTTGATGAGCTTCATAAATCACTTGGTGTGCTTAGAAGGTTAAGCAAAAAGACTTTTAGTACACAAATGGGAGATCTTAATACATGGATTAGTTCAGCGCTTACCGATGAAGATACTTGTCTTGATGGATTCGAAGGTAAGAATGAAAAGCAAGTTAAATTGCTGCAAAATAAGGTTCAGAATGTTTCTTGTATAACAAGTAACGCTCTTGCTCTTGTTAACAAACTTGCTTCTACAGGTTTAGAAAGTATTATTATTGATCCATAG 624 0.3734 MFTKLRLMLLLIIAIFLSLSTNTSQNQMVYPKENINNNNNNVKEACSVTRYKNLCIHTLAQFSNTAGRTPSKWARAGVSVTIGEVKNVQAYLKKLKTRGNMKGRNKVALLDCIETFGYALDELHKSLGVLRRLSKKTFSTQMGDLNTWISSALTDEDTCLDGFEGKNEKQVKLLQNKVQNVSCITSNALALVNKLASTGLESIIIDP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05426 207 CDD PMEI-like_3 45 197 - -
Vivi6g05426 207 FunFam Pectinesterase inhibitor 3 37 196 - -
Vivi6g05426 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 197 IPR035513 -
Vivi6g05426 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 191 - -
Vivi6g05426 207 Pfam Plant invertase/pectin methylesterase inhibitor 41 191 IPR006501 GO:0004857
Vivi6g05426 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 196 IPR035513 -
Vivi6g05426 207 SMART PMEI_2 37 191 IPR006501 GO:0004857
Vivi6g05426 207 NCBIfam pectinesterase inhibitor domain 9 195 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05426 Vivi-Chr6 159756143 159757300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05426 42 200 Carbohydrate Esterase AT3G14310 37.805 1.56e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05426 - - gmx:100791264 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05426 6 159756143 159757300 Vivi6g05426 6 159756143 159757300 ECH