Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05402 ATGGAATCCGAAGCATCTGTTTCATTTTCAGCTGCATCTCTTGTGGAAGACGTACTTCAGCAACACGGTCATCGTCTCAAAGATCTTGATTTAGAATATAGGAAAGCAGAAGAAGCTGCATGTAGAAGATATGAAGCGGCAGGGTGGTTGAGAAAAATGATCGGAGTTGTTGCGGCTAAGGATTTACCGGCAGAGCCTTCTGAAGAAGAGTTTAGGCTTGTTTTGAGGAGTGGAATTATTTTATGTAATGCTATTAATAAGGTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCGGTTGATTCTGCACTGATCCCGAACGGGGCACCATTATCGGCTTATCAATATTTTGAAAATGTGAGGAATTTTATGGTGGCTGTACAAGAAATTGGACTTCCTACGTTCGAGCCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAATTGCGTTTTGGCTCTTAAGTTGTACTCTGAATGGAAGCAGAATGGTGCAAATGGTGCGTGGAAATTTGGTGGAAATCCCAAACCTACTATTTCCGCTAAATCTTTTGTGAGAAAAAATTCGGATCCATTTACTAATTCCTTGTCAAGGACCTCTTCAATCAATGAAAAAACTCTGGCTACTCTTAATTCTGATATTGAGTCTAGTAAAATGTCTGGTTCCCTTTCTTTGAGTAAGCTTGTTCGTTCTATTCTATCGGATAAAAGGCCAGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAATAAGGTAGTTGAGGAGTTTGAACACCGTATTGCAAGCCAAGGTGAACAGACAAAAAATACTTTAAGAGATCATGTTTCTCAAACAAACGGATCTGCCTCAAAGTTTGTCTTGGCAGATAAAAAGGTGGAGAACAAGATTCATATGGTAGCTAAGAAAGAGGATTACATTCATAAAAATCATGTGGCTGCTGAGGAATTGCAAAGCCAACACCTTAAACAGAAAATGCTTTTTGACCAACAGCAAAGAGACATTCAAGAGCTAAAGCTTACTCTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAGTTTCGTGACGAATTTTCCAATCTTGGAATGCATATTCATGACTTAGCTCAGGCTGCCTCTGGATATCATAGAGTTCTGGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAGGGAAGTATTAGGGTATATTGTCGAATAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAGTAGAAAATATAGAAGATGGAACAATCACAGTTGGTATTCCTTCGAGGAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCCACCCAAGCGGAGGTATTCCTGGATATGCAACCACTTATTAGATCTGTTCTTGATGGTTATAATGTCTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACAATGACCGGACCAAAAGAGATCACTGAGAAGAGCCAAGGTGTAAATTACAGGGCTCTAAGCGATTTGTTTTTTATAGCCGAGCAAAGAAAGGACACTTTCCAGTATGATGTTTGTGTTCAAATGATTGAAATTTATAATGAGCAAGTCCGGGATCTGTTGGTCACTGATGGAACAAACAAAAAATTAGAAATTCATAGCAGCTCTCACAAAGGGCTCAGTGTGCCAGATGCAAGCCTTGTCCCAGTGTCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCATAGGAACCGTGCAGTTGGAGCAACAGCCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACAACTGGAGCAACCCTCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTAGATAAATCAGAGGCAACCGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTTTATCAGCTTTGGGCGATGTCATAGCTTCCCTTGCTCATAAAAACTCACACATACCTTATAGGAATAGTAAACTCACACAATTGCTTCAAGATTCACTTGGAGGACAGGCCAAGACCCTGATGTTTGTTCACATCAGTCCAGAAAGTGATGCAATTGGAGAAACAATTAGTACTTTAAAATTTGCAGAAAGAGTTGCGACAGTTGAACTTGGTGCTGCTCAAGTAAACAAAGATGGTGCAAATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAAGCAGCACTGGCAAGAAAAGAAGGGGAATCAGAACATTCTTTTTCTGGAAGCTCTGAAAAATATAGGACAAAGGCTGAGGTATCCCCTTATCATTCAAACCAGCGGGTTGTTGACTCCGGCAACCGGCTTGGATACAGACGACCAATGGTTGAAGTTGGCAACATAGAGCTTCAGAATAAAACCACATTGAGACAGAAAACGAAAAGCATTGATTTTGATGAGATATCAGTAAACTCACCACCCTGGCCCCCAATAAATAGTCTTGGACACAACGACGGTGAGGATGAGAAAGAAACATGTTCCGGAGAATGGGTTGATAAGGTAATGGTAAACAAGCTTGCAAACAAAACTGACGACAACCCAAGCAACCTCCTGGGTTGTTGGCAAGAAAGCAATGGAAACTTATCCGAGGCCTTTTATCAAACGTATCTCCAAGATTCTTCCAAAATGTATTCAGAACAGTCCTATAATATGTTCATGGGAGGTAACCAGTTTAATAGCAGTATGGCTTCAGATGATAACATGGATGAGATTGATGCCGCAACCAGTGATTCCTCGGAACCTGACTTGCTTTGGCAATTTAATCATTCTAAACTTACCGGTTTGACCAATGGAATTGGATCAAAGGCTATTATAAAATCTGTCTCAAAGCCTACAAAAAGCCCACAATTAAGCAAGAGTTCTGTTCATTCTTCTATTGGTCCTTCCCCTTCATTGAAACAATCCAAAGTTGTCTCACATAAGACAGGAAGGAGTCCAGCTCCTGTTGACATGAAACGTAAAATTGGGGGTAGAAAGTAA 3048 0.4068 MESEASVSFSAASLVEDVLQQHGHRLKDLDLEYRKAEEAACRRYEAAGWLRKMIGVVAAKDLPAEPSEEEFRLVLRSGIILCNAINKVQSGAVPKVVESPVDSALIPNGAPLSAYQYFENVRNFMVAVQEIGLPTFEPSDLEQGGKSSRIVNCVLALKLYSEWKQNGANGAWKFGGNPKPTISAKSFVRKNSDPFTNSLSRTSSINEKTLATLNSDIESSKMSGSLSLSKLVRSILSDKRPEEIPMLVESVLNKVVEEFEHRIASQGEQTKNTLRDHVSQTNGSASKFVLADKKVENKIHMVAKKEDYIHKNHVAAEELQSQHLKQKMLFDQQQRDIQELKLTLHTTKAGMQFMQMKFRDEFSNLGMHIHDLAQAASGYHRVLEENRKLYNEVQDLKGSIRVYCRIRPFFPGQPNQLSAVENIEDGTITVGIPSRNGKGQRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFFIAEQRKDTFQYDVCVQMIEIYNEQVRDLLVTDGTNKKLEIHSSSHKGLSVPDASLVPVSSTIDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLTTGATLRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAHKNSHIPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAAQVNKDGANVKELKEQIASLKAALARKEGESEHSFSGSSEKYRTKAEVSPYHSNQRVVDSGNRLGYRRPMVEVGNIELQNKTTLRQKTKSIDFDEISVNSPPWPPINSLGHNDGEDEKETCSGEWVDKVMVNKLANKTDDNPSNLLGCWQESNGNLSEAFYQTYLQDSSKMYSEQSYNMFMGGNQFNSSMASDDNMDEIDAATSDSSEPDLLWQFNHSKLTGLTNGIGSKAIIKSVSKPTKSPQLSKSSVHSSIGPSPSLKQSKVVSHKTGRSPAPVDMKRKIGGRK 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05402 1015 MobiDBLite consensus disorder prediction 966 997 - -
Vivi6g05402 1015 SMART ch_5 42 160 IPR001715 GO:0005515
Vivi6g05402 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 756 IPR027417 -
Vivi6g05402 1015 MobiDBLite consensus disorder prediction 756 784 - -
Vivi6g05402 1015 Coils Coil 731 758 - -
Vivi6g05402 1015 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Vivi6g05402 1015 Gene3D - 27 177 IPR036872 -
Vivi6g05402 1015 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 956 IPR027640 GO:0003777|GO:0007018
Vivi6g05402 1015 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Vivi6g05402 1015 MobiDBLite consensus disorder prediction 966 1015 - -
Vivi6g05402 1015 FunFam Kinesin-like protein KIN-14I isoform A 394 766 - -
Vivi6g05402 1015 ProSiteProfiles Kinesin motor domain profile. 399 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g05402 1015 CDD CH_AtKIN14-like 42 159 - -
Vivi6g05402 1015 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g05402 1015 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g05402 1015 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g05402 1015 PRINTS Kinesin heavy chain signature 594 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g05402 1015 SUPERFAMILY Calponin-homology domain, CH-domain 37 172 IPR036872 -
Vivi6g05402 1015 CDD KISc_C_terminal 397 726 - -
Vivi6g05402 1015 Coils Coil 19 39 - -
Vivi6g05402 1015 SMART kinesin_4 397 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g05402 1015 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Vivi6g05402 1015 Gene3D Kinesin motor domain 394 765 IPR036961 -
Vivi6g05402 1015 Pfam Kinesin motor domain 406 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05402 Vivi-Chr6 159405455 159411527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05402 387 724 Calmodulin-binding Proteins AT5G65930 43.363 2.68e-77 275