Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05307 ATGGAAACTTTATCAAACTCTGTTTCAAATATCAAAATCTCATCACCCCCACCACCAGCATCAACACCAAATCGTGAATTTCATCGCTTCACAAGAACTCCTCATCCAATCCCTAACCGGTACATTGAGACACAGTTTCTTGTAGAAGTGGTCAGTAAAGAAGAAATGAAGAAGGTCTTTGGTGTGGGGGTTCTTCACGTAACAGCTTCTTCTTCCATGGAAACTTTACCAAACTCTGTTTCAAATCTCAAAATCTCATCCCTTCCACCACCAACATCAACACCAATTCGTGAATTCCATCGCTTCACAAGAACTCCTCATCCAATCCCTAACCGGCCTCCAAAACCAAAATCTCAAAAAATCATAAATTTCGTACACAACAATCACTCTCTACCATTTTCTTCTTCAACAACCCCGTCTCTCATACTCAAACAATCTTCTCCAATATTCCATCACAAGCCTGCTACTGGATATGCTGCTGCAGTCATAGATGTAGCTCAAACCAGCAACACGCTTCATGCAGTTCAAAGGGATGTTCTTCGACTCTTGAAATTCCTCAGGAAATCGAAGCTTCAATCAGATGGTGGTATCATTGATGTTTCAGCGGTTAGGAAGGTGGTGGAACAGGGGAATTTTGAGCGGCATGTGGTTGGGTTGGTGAAGATGTTGATGAAGAAGAAGAAATTGGGAATGGTTGGGCAAGTGTTGGAAGAGTTTGAGAGGATTTATGATGAATTGTGTGGAACTCAAGTTGTGTTGGTTTCATCAAAAACAGAAATTGGAAAAGATGAAATGTTTGGAATTGCAAAAAGTGTGCACAAACTTAGTGGAGCATTTAGGGTTAGGGTTAGGAATTTGGTTCAAGATTTTTTTTTTTTTGACAAATGGTTCAAGATTAGAACATTGTTATGTGTGAAAGTTTGTAATGCAAATGTTGAAAACTGA 945 0.3968 METLSNSVSNIKISSPPPPASTPNREFHRFTRTPHPIPNRYIETQFLVEVVSKEEMKKVFGVGVLHVTASSSMETLPNSVSNLKISSLPPPTSTPIREFHRFTRTPHPIPNRPPKPKSQKIINFVHNNHSLPFSSSTTPSLILKQSSPIFHHKPATGYAAAVIDVAQTSNTLHAVQRDVLRLLKFLRKSKLQSDGGIIDVSAVRKVVEQGNFERHVVGLVKMLMKKKKLGMVGQVLEEFERIYDELCGTQVVLVSSKTEIGKDEMFGIAKSVHKLSGAFRVRVRNLVQDFFFFDKWFKIRTLLCVKVCNANVEN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05307 314 Gene3D - 152 246 IPR026015 -
Vivi6g05307 314 Pfam ATP synthase delta (OSCP) subunit 156 286 IPR000711 GO:0015986|GO:0046933
Vivi6g05307 314 MobiDBLite consensus disorder prediction 1 15 - -
Vivi6g05307 314 PANTHER ATP SYNTHASE DELTA CHAIN 140 287 IPR000711 GO:0015986|GO:0046933
Vivi6g05307 314 MobiDBLite consensus disorder prediction 1 35 - -
Vivi6g05307 314 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 155 246 IPR026015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05307 Vivi-Chr6 157796362 157803510 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05307 154 287 Primary Pumps ATPases AT4G09650 25.342 9.92e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05307 K02113 - gmx:100526851 172.94