Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05305 ATGGAAACTTTACCAAACTCCGTTTCAAATCTCAAACTCTCATCCCTTCCACCACCAACATCAACACCAAATCGTGAATTTCATCGCTTCACAAGAACTCCTCATCCAATCCCTAACCGGCCTCCAAAACCAAAACCTCAAAAAATCATAAATTTCCTACACAACAATCACTCTCTACCATTTTCTACTTCAACAACCCCATCTGTCATACTCAAACAATCTTCTCCAATATTCCATCACAAGCCTGCTACTGGATATGCTGCTGCAATCATAGATGTAGCTCAAACCAGCAACACACTTCATGCAGTTCAAAGGGATGTTCATCGACTCTTGAAATTCCTCAGGAAATCGAAACTTGAATCAGATGGTGGTATTATTGATGCTTCGGCGGTGAGGAAGGTGGTGGAGCAGGGGAATTTTGAGCGGCATGTGGTTGGGTTGGTGAAGATGTTGATGAAGAAGAAGAAATTGGGAATGGTTGGGCAAGTGTTGGAAGAGTTTGAGAGGATATATGATGAATTGTGTGGAACTCAAATTGTGTTGGTTTCATCGAAAAGAGAGATTGGTAAAGATGAAATGTTTGGGATTGCAAAATCTGTGCACAAATTAAGTGGAGCAGTTAGGGTTAGGGTTAGGAATTTTGTTCAAGATTAG 654 0.4098 METLPNSVSNLKLSSLPPPTSTPNREFHRFTRTPHPIPNRPPKPKPQKIINFLHNNHSLPFSTSTTPSVILKQSSPIFHHKPATGYAAAIIDVAQTSNTLHAVQRDVHRLLKFLRKSKLESDGGIIDASAVRKVVEQGNFERHVVGLVKMLMKKKKLGMVGQVLEEFERIYDELCGTQIVLVSSKREIGKDEMFGIAKSVHKLSGAVRVRVRNFVQD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05305 217 PANTHER ATP SYNTHASE DELTA CHAIN 68 215 IPR000711 GO:0015986|GO:0046933
Vivi6g05305 217 Pfam ATP synthase delta (OSCP) subunit 84 213 IPR000711 GO:0015986|GO:0046933
Vivi6g05305 217 MobiDBLite consensus disorder prediction 1 47 - -
Vivi6g05305 217 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 83 174 IPR026015 -
Vivi6g05305 217 Gene3D - 80 174 IPR026015 -
Vivi6g05305 217 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05305 Vivi-Chr6 157759579 157760437 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05305 82 215 Primary Pumps ATPases AT4G09650 26.897 4.13e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05305 K02113 - gmx:100526851 170.244