Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05237 ATGACGACAATTCGTAGGTTTTGCTGCAACGACCTTCTTCGTTTTACAAATGTGAATCTTGACCATCTCACTGAAACGTTTAATATGTCCTTCTACATGACCTATCTTGCGCGATGGCCCGATTATTTCCATGTTGCTCAAGCTCCTGGCAACCGAATTATGGGTTACATTATGGGTAAGGTCGAGGGGCAGGGAGACTCTTGGCATGGTCATGTAACTGCAGTAACCGTTGCTCCAGAGTATCGCAGGCAACAGTTAGCCAAGAAACTAATGAATCTTCTGGAAGACATCAGTGACAATATTGACAAAGCCTACTTTGTTGATCTATTTGTGAGAGCTTCAAATGCACCAGCCATCAAGATGTATGAAAAGCTTGGCTATGTGATATATCGACGAGTGCTACGTTATTATTCGGGGGAAGAAGATGGATTGGATATGAGAAAAGCATTATCTCATGATGTTGAAAAGAAGTCCATCATCCCTCTTAAACGGCCGGTAACTCCTGATGAATTAGAATATGACTAA 525 0.421 MTTIRRFCCNDLLRFTNVNLDHLTETFNMSFYMTYLARWPDYFHVAQAPGNRIMGYIMGKVEGQGDSWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYEKLGYVIYRRVLRYYSGEEDGLDMRKALSHDVEKKSIIPLKRPVTPDELEYD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05237 174 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Vivi6g05237 174 FunFam N-alpha-acetyltransferase 20 2 161 - -
Vivi6g05237 174 Gene3D - 2 162 - -
Vivi6g05237 174 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Vivi6g05237 174 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Vivi6g05237 174 CDD NAT_SF 50 97 - -
Vivi6g05237 174 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi6g05237 Acetyltransf_1 6.7e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05237 K17972 - twl:120004610 347.821