Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05217 ATGGGAACCAGTGAGGAAGAGAAATCTACCAAAACTGAAAAGCCTTCTTCACCTGTAACAGTTGATCAGACCAATCAAACAAACCCGGCGAATGTTCATGTCTATCCTGATTGGGCAACCATGCAGGCATATTATGGACCAAGAGTTGCCATGCCACAATACTACAACTCCGCTGTGGCTTCTGGTCACACTCCTCACCCATACATGTGGGGGCCACCACAGACTATGATGCAACCTTATGGACATCCTTATGCAGCAATGTATCCACATGGAGGGGTTTATACTCACCCCGCAGTTCCTATTGGGCCACACCCACATGGTCAAGGAATTTCATCTTCACCTGCTACCGGGACTCCTTTAAGCTTAGAGACACCTACCAAATCATCTGGAAATACCGATCAGGGTCTGATGAAGAAATTAAAAGGATTTGATGGACTTGCGATGTCAATAGGAAATGGCCATGCTGAGAGTGCAGAGCCTGGAGCTGAAAGTAGGCTATCACACAGTGTGGATACTGATGGTTCGAGTGATGGAAGTGACGGCAACACTTCAGGGGCTAATCAAACAAGGAAAAGAAGCCGTGAGGGAACACCGACTACCGACGGAGAAGAGAAAACTCAAACACAAGGAAGTGATGTTTCCAAAGAAATTATAGCTTCTAACAAGATGATGGCAGTTGCCCCTGTCGGTGTAGCAGGACAACTAGTTGGACCTGTAGTTTCTTCTGCAATGACCACTGCACTGGAGCTGAGAAAGCCTTCCATTGTTCATTCTAAAACAAATCCTGCCGCAGAAGGTTGGTTACAGAATGAGCGTGAACTGAAGCGTGAGAGGAGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAGGCCGAAGAGCTGGCACGAAAAGTTGATGCCTTGAATGCTGAGAGTGCATCGCTTAAATCAGAAATAAATCGACTGACCGAGAGTTCTGAAAAACTTAAGATGGAAAATGCTGCACTAAGGGAAAAATTTAAAATTGCTCAACTGGGACAACCAAAAGAGATAATTTTGACCAACATTGACAGCCAGGCCCAGAGGATTACACCTGTAAGTACAGAAAACTTATTATCAAGAGTTAATAATAATTCGGGTTCGAATGATAGAACTGTGGAAGATGAGAATGGTTACTGTGACAACAAACCAAATAATGGTGCAAAACTGCATCAACTACTGGATACAAGTCCTAGAGCTGATGCTGTGGCTGCTGGTTGA 1260 0.4484 MGTSEEEKSTKTEKPSSPVTVDQTNQTNPANVHVYPDWATMQAYYGPRVAMPQYYNSAVASGHTPHPYMWGPPQTMMQPYGHPYAAMYPHGGVYTHPAVPIGPHPHGQGISSSPATGTPLSLETPTKSSGNTDQGLMKKLKGFDGLAMSIGNGHAESAEPGAESRLSHSVDTDGSSDGSDGNTSGANQTRKRSREGTPTTDGEEKTQTQGSDVSKEIIASNKMMAVAPVGVAGQLVGPVVSSAMTTALELRKPSIVHSKTNPAAEGWLQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVDALNAESASLKSEINRLTESSEKLKMENAALREKFKIAQLGQPKEIILTNIDSQAQRITPVSTENLLSRVNNNSGSNDRTVEDENGYCDNKPNNGAKLHQLLDTSPRADAVAAG 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05217 419 MobiDBLite consensus disorder prediction 168 193 - -
Vivi6g05217 419 MobiDBLite consensus disorder prediction 109 135 - -
Vivi6g05217 419 MobiDBLite consensus disorder prediction 373 403 - -
Vivi6g05217 419 MobiDBLite consensus disorder prediction 101 137 - -
Vivi6g05217 419 MobiDBLite consensus disorder prediction 151 212 - -
Vivi6g05217 419 Coils Coil 284 339 - -
Vivi6g05217 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 273 336 IPR004827 GO:0003700|GO:0006355
Vivi6g05217 419 Pfam Disordered region downstream of MFMR 133 262 - -
Vivi6g05217 419 MobiDBLite consensus disorder prediction 14 30 - -
Vivi6g05217 419 Gene3D - 274 327 - -
Vivi6g05217 419 CDD bZIP_plant_GBF1 276 324 IPR045314 GO:0003700|GO:0006355
Vivi6g05217 419 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 386 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi6g05217 419 SMART brlzneu 271 335 IPR004827 GO:0003700|GO:0006355
Vivi6g05217 419 MobiDBLite consensus disorder prediction 273 295 - -
Vivi6g05217 419 Pfam bZIP transcription factor 271 333 IPR004827 GO:0003700|GO:0006355
Vivi6g05217 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 278 293 IPR004827 GO:0003700|GO:0006355
Vivi6g05217 419 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Vivi6g05217 419 SUPERFAMILY Leucine zipper domain 274 330 IPR046347 GO:0003700|GO:0006355
Vivi6g05217 419 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05217 Vivi-Chr6 156933503 156937989 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05217 1 419 bZIP Transcription Factor Family AT2G46270 52.113 7.71e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi6g05217 MFMR_assoc 6.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05217 K09060 - gmx:100781875 663.299