Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05215 ATGGGAACCAGTGAGGAAGAGAAATCTACCAAAACTGAAAAGCCTTCTTCACCTGTAACAGTTGCATATTATGGACCAAGAGTTGCCATGCCACAATACTACAACTCCGCTGTGGCTTCTGGTCACACTCCTCACCCATACATGTGGGGGCCACCACAGACTATGATGCAACCTTATGGACATCCTTATGCAGCAATGTATCCACATGGAGGGGTTTATACTCACCCCGCAGTTCCTATTGGGCCACACCCACATGGTCAAGGAATTTCATCTTCACCTGCTACCGGGACTCCTTTAAGCTTAGAGACACCTACCAAATCATCTGGAAATACCGATCAGGGTCTGATGAAGAAATTAAAAGGATTTGATGGACTTGCGATGTCAATAGGAAATGGCCATGCTGAGAGTGCAGAGCCTGGAGCTGAAAGTAGGCTATCACACAGTGTGGATACTGATGGTTCGAGTGATGGAAGTGACGGCAACACTTCAGGGGCTAATCAAACAAGGAAAAGAAGCCGTGAGGGAACACCGACTACCGACGGAGAAGAGAAAACTCAAACACAAGGAAGTGATGTTTCCAAAGAAATTATAGCTTCTAACAAGATGATGGCAGTTGCCCCTGTCGGTGTAGCAGGACAACTAGTTGGACCTGTAGTTTCTTCTGCAATGACCACTGCACTGGAGCTGAGAAAGCCTTCCATTGTTCATTCTAAAACAAATCCTGCCGCAGAAGGTTGGTTACAGAATGAGCGTGAACTGAAGCGTGAGAGGAGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAGGCCGAAGAGCTGGCACGAAAAGTTGATGCCTTGAATGCTGAGAGTGCATCGCTTAAATCAGAAATAAATCGACTGACCGAGAGTTCTGAAAAACTTAAGATGGAAAATGCTGCACTAAGGGAAAAATTTAAAATTGCTCAACTGGGACAACCAAAAGAGATAATTTTGACCAACATTGACAGCCAGGCCCAGAGGATTACACCTGTAAGTACAGAAAACTTATTATCAAGAGTTAATAATAATTCGGGTTCGAATGATAGAACTGTGGAAGATGAGAATGGTTACTGTGACAACAAACCAAATAATGGTGCAAAACTGCATCAACTACTGGATACAAGTCCTAGAGCTGATGCTGTGGCTGCTGGTTGA 1197 0.447 MGTSEEEKSTKTEKPSSPVTVAYYGPRVAMPQYYNSAVASGHTPHPYMWGPPQTMMQPYGHPYAAMYPHGGVYTHPAVPIGPHPHGQGISSSPATGTPLSLETPTKSSGNTDQGLMKKLKGFDGLAMSIGNGHAESAEPGAESRLSHSVDTDGSSDGSDGNTSGANQTRKRSREGTPTTDGEEKTQTQGSDVSKEIIASNKMMAVAPVGVAGQLVGPVVSSAMTTALELRKPSIVHSKTNPAAEGWLQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVDALNAESASLKSEINRLTESSEKLKMENAALREKFKIAQLGQPKEIILTNIDSQAQRITPVSTENLLSRVNNNSGSNDRTVEDENGYCDNKPNNGAKLHQLLDTSPRADAVAAG 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05215 398 Coils Coil 263 318 - -
Vivi6g05215 398 SUPERFAMILY Leucine zipper domain 253 309 IPR046347 GO:0003700|GO:0006355
Vivi6g05215 398 Pfam bZIP transcription factor 250 312 IPR004827 GO:0003700|GO:0006355
Vivi6g05215 398 MobiDBLite consensus disorder prediction 1 20 - -
Vivi6g05215 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 315 IPR004827 GO:0003700|GO:0006355
Vivi6g05215 398 MobiDBLite consensus disorder prediction 147 172 - -
Vivi6g05215 398 MobiDBLite consensus disorder prediction 130 191 - -
Vivi6g05215 398 Pfam G-box binding protein MFMR 10 79 IPR012900 -
Vivi6g05215 398 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 365 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vivi6g05215 398 CDD bZIP_plant_GBF1 255 303 IPR045314 GO:0003700|GO:0006355
Vivi6g05215 398 MobiDBLite consensus disorder prediction 88 114 - -
Vivi6g05215 398 MobiDBLite consensus disorder prediction 80 116 - -
Vivi6g05215 398 Gene3D - 253 306 - -
Vivi6g05215 398 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Vivi6g05215 398 SMART brlzneu 250 314 IPR004827 GO:0003700|GO:0006355
Vivi6g05215 398 MobiDBLite consensus disorder prediction 252 274 - -
Vivi6g05215 398 Pfam Disordered region downstream of MFMR 112 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05215 Vivi-Chr6 156933503 156938241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05215 1 398 bZIP Transcription Factor Family AT2G46270 49.403 1.55e-109 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi6g05215 MFMR_assoc 6.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05215 K09060 - gmx:100781875 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05215 6 156933503 156938241 Vivi7g04336 7 112996568 113002913 PCT