Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05150 ATGGAGAAATATGTGGCTGCGAGAAATAAAAAGGTTAGTAGTTATATACATGCTGATCTTTGCTTATCCATTCTATCAAATCTATCTCTGAAATCTTTGAAGCGTTTCGAATGTGTATGCAAATCATGGATTCATTTGTTAGAGAACCCTAATTTCAAAAGCTTGGTTCACAAAAGTTTCTTATCTAATAATCGTTGTTATTATGATGATTCATCTATCCTCATACATCAAGATATAAATAATAATCAATCAGTGATGTATTCTATTTCTGGTGAGAGGTTTGAAAATAGGACCAAATTAGATTGGCCAAATCCCTTTCAAGAAGATGACCCTAAATTTTATATATCGGGATCTAATAGTATTAAAGGGATTTTTTGCCTAATTAATTACTCACAACCCGATATAAGAGTTGTATTGTGGAACCCAACTACTGGAGAATTCAAAGTTGTTCCTACCAGTCCTAATGAGTTTGTCCCAGATATGGATTTTGATGCTGCCCAATATGGTTTTGGATACGATTCCTTTAGTGATGACTATAAGGTGATTCAATGTGTTTTGATGTCATCAGAAGATCTATCTTTAGACCCTTTTTGGGAGATATATAGCCTAAAAAGTAACTCATGGAAACAACTTGAATTTGACATCCCTATAAATTATCAAGAAAATGGAGTGTCTCTGGAAGGAGTGTTTTATTGGTATGGTGAAAACGAAGAAAATAAAGATGATGAAGCATATATTTTTTCATTTGATCTAAACAGTGAGATATTTGTTACTACACCATTACCCTTAACCGATGATAACTTTGATTTTCATTATGTATGTAGAGGTTTGGTGGTGTTAAATGGATCAATTGCTTTGATATCAAATTATACAAATATAAATAATTTCCATGTAGCTATTTTGGGTGAAATTGGTATGAAAGAATCATGGGTTAAACTCTTTATTGTTCCATGCTTACCTTGCATTAAGTATCCAATCGGAACAGGAAAGAATGGAGATATATTTTTTATGACACAAGATGGTAAACTAGTCTATTATGACTTAAGCACTCAGATTATGGAGGAGCTTAGTTTTCAAGGAAATAGATTTATGGGTAAGATTATAACTTATAAAAGAATTCTTCTTCCAATCAGAGAACTAGATGAGTAG 1149 0.3211 MEKYVAARNKKVSSYIHADLCLSILSNLSLKSLKRFECVCKSWIHLLENPNFKSLVHKSFLSNNRCYYDDSSILIHQDINNNQSVMYSISGERFENRTKLDWPNPFQEDDPKFYISGSNSIKGIFCLINYSQPDIRVVLWNPTTGEFKVVPTSPNEFVPDMDFDAAQYGFGYDSFSDDYKVIQCVLMSSEDLSLDPFWEIYSLKSNSWKQLEFDIPINYQENGVSLEGVFYWYGENEENKDDEAYIFSFDLNSEIFVTTPLPLTDDNFDFHYVCRGLVVLNGSIALISNYTNINNFHVAILGEIGMKESWVKLFIVPCLPCIKYPIGTGKNGDIFFMTQDGKLVYYDLSTQIMEELSFQGNRFMGKIITYKRILLPIRELDE 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05150 382 SUPERFAMILY F-box domain 18 62 IPR036047 GO:0005515
Vivi6g05150 382 Coils Coil 377 382 - -
Vivi6g05150 382 Pfam F-box associated 223 344 IPR006527 -
Vivi6g05150 382 NCBIfam F-box protein interaction domain 121 348 IPR017451 -
Vivi6g05150 382 PANTHER BNACNNG10540D PROTEIN 10 357 - -
Vivi6g05150 382 Gene3D - 2 52 - -
Vivi6g05150 382 SUPERFAMILY Galactose oxidase, central domain 137 352 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05150 Vivi-Chr6 155658027 155659175 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05150 186 262 Carbohydrate Esterase AT1G25141 32.911 2.27e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05150 - - vvo:131612883 572.392