Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05106 ATGGGATTACCCTCCTCAGCAATTTCAGTGCTTACATCACTTGTGAAGCGCTATCACAGGCTTACATTGACAGAGAGGTATGTTGAACAAAGAGTAGACGTTAAAAGCTTGAGTTTGCAAACCCTGTTTAGATTAAACGTTGGCGGGCAGTATATGTCTCCAGCCCAAGATTCTGGCCTTTCGAGGATGTGGTATGACGACACGCCTTACCTGTATGGTGCATCCACAGGTGTCACCAACAAAGCTTCCAAGAATGTTCGAATCAACTACCAGACCATGCCACAATACATTGCTCCTGAAACTGTCTACTCAACATCAAGATCAATGGGAACAGATAAGGACGCAAACTTACAATACAACCTCACGTGGGTTTTCCAAGTTGATCCAAATTCCATGTACCTCGTGAGGTTGCATTTCTGTGAATATTATTATTCCAAGGTGAATGAGATTGTTTTCAATATACTTATCAACAACCAAACGGCAGAGTCTCAAGCTGATGTTATTGGGTGGACAGGCGGTAAAGGTGTGCCAACTTATAAGGACTATGTGATATATGTCCAAGACGGGGAAGGGGATGAAAAACTTTGGCTTGCGCTGCAGCCAGCACCTGAGACAAAGCCAGAGTTCTATGATGCCATACTCAATGGGGTGGAGATATTCAAGCTCAACGACACAGACTTGTCTGGCCCCAATCCTCGGCCTTCAGACATGCTTCTAAAAGATCAAGCAGAGGAAAGAGGTTTCCAAACACGCGAAACATATAACAGGAAAGCCGTCATTGGTGGAGCTGCTGGAGGTGCTGCAGGTTTTGCCTTTATGGCAGCAATCTGCATTACTGTCTTCAACAAGAAGAAGAGGGTTCCAGGGTCATCCACAAACACAAGCTGGCTTCCCATATATGGAAACTCACACACAACTGACAGTAAATCCACGTCTGGGAAGAGCATTGCTAGTGCAAACCTTGCTGCCATGTCTCAAGGTCTGTGTCGATATTTTTCCTTACAAGAGATAAAGCAAGCAACCAAAAGTTTTGATGAGTCCCTGGTTATTGGGGTTGGTGGATTTGGAAAGGTTTACAAAGGTATCATTGATAATGGAACGTTAGTGGCAATTAAGAGGTCAAATCCACAATCAGATCAAGGAGTCAATGAATTCCAGACTGAGATTGAGATGCTTTCTAAGTTGAGACACAAGCATTTGGTGTCCTTAATTGGATTTTGCGAGGAAGATAATGAGATGTGTTTGGTTTATGACTACATGGATCTTGGAACCTTTAGGGAACATTTGTATAAAGGTATCAAGCCTTTAAATATTCTAACATGGAAGCAAAGATTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACAGGGGCAAAGTACACCATCATTCATAGAGATGTCAAAACAACAAATATTCTTTTGGATAATAACTGGAATGCCAAGGTATCAGATTTTGGATTGTCAAAAACTGGTCCGGAGATGAACGCTGGCCATGTTAGTACTGTGGTGAAAGGTAGTTTTGGCTACTTGGATCCTGAGTACTTCAGGAGGCAACAATTGACTGAAAAATCTGATGTCTACTCATTTGGGGTTGTCCTGTTTGAGGCTCTATGTGCCAGGCCAGTTCTGAATACTAATCTTCCAAAGGAACAAGTTAGTCTTGCAGAATGGGCTTTGCTCTGCAATCAGAAAGGAACAATAGAGGATATCATTGACCCCAATATCAAGGGAACAATAAATCCAGAAAGCTTGAAGAAGTTTGTGGACACAGCTGAAAAATGTTTGTCCGATCACGGAACTGATCGTCCCTCCATGAATGATTTGTTGTGGAATCTAGAATTTGCTCTCAACCTGCAAGAAAACAAGGATGGCTCAACCCACTCTTCAGCTCGAGTTGATGAAAGTGAGTTTGAAGAAATTAACTTAGAAGACAACAACATGGCAAACCATTATAAAAACCTGAGCCTTGGAAGTGAGTATGACCTTAGCCAAGGTTCTGATTCCGGTAACAGTCCGACTGAAATCTTCTCACAACTTGTTAATTCAGAAGGGAGATGA 2070 0.4256 MGLPSSAISVLTSLVKRYHRLTLTERYVEQRVDVKSLSLQTLFRLNVGGQYMSPAQDSGLSRMWYDDTPYLYGASTGVTNKASKNVRINYQTMPQYIAPETVYSTSRSMGTDKDANLQYNLTWVFQVDPNSMYLVRLHFCEYYYSKVNEIVFNILINNQTAESQADVIGWTGGKGVPTYKDYVIYVQDGEGDEKLWLALQPAPETKPEFYDAILNGVEIFKLNDTDLSGPNPRPSDMLLKDQAEERGFQTRETYNRKAVIGGAAGGAAGFAFMAAICITVFNKKKRVPGSSTNTSWLPIYGNSHTTDSKSTSGKSIASANLAAMSQGLCRYFSLQEIKQATKSFDESLVIGVGGFGKVYKGIIDNGTLVAIKRSNPQSDQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDNEMCLVYDYMDLGTFREHLYKGIKPLNILTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDNNWNAKVSDFGLSKTGPEMNAGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNTNLPKEQVSLAEWALLCNQKGTIEDIIDPNIKGTINPESLKKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQENKDGSTHSSARVDESEFEEINLEDNNMANHYKNLSLGSEYDLSQGSDSGNSPTEIFSQLVNSEGR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05106 689 Gene3D - 37 223 - -
Vivi6g05106 689 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Vivi6g05106 689 MobiDBLite consensus disorder prediction 666 689 - -
Vivi6g05106 689 FunFam Receptor-like protein kinase FERONIA 420 633 - -
Vivi6g05106 689 Pfam Malectin-like domain 34 221 IPR024788 -
Vivi6g05106 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Vivi6g05106 689 Gene3D Transferase(Phosphotransferase) domain 1 420 642 - -
Vivi6g05106 689 FunFam receptor-like protein kinase FERONIA 305 419 - -
Vivi6g05106 689 ProSiteProfiles Protein kinase domain profile. 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05106 689 FunFam FERONIA receptor-like kinase 37 223 - -
Vivi6g05106 689 Pfam Protein kinase domain 348 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05106 689 CDD STKc_IRAK 350 617 - -
Vivi6g05106 689 Gene3D Phosphorylase Kinase; domain 1 303 419 - -
Vivi6g05106 689 SMART serkin_6 344 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05106 689 SUPERFAMILY Protein kinase-like (PK-like) 322 619 IPR011009 -
Vivi6g05106 689 PANTHER OS07G0166700 PROTEIN 328 623 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05106 Vivi-Chr6 155197452 155199888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05106 36 689 Receptor kinase-like Gene Family AT3G51550 56.140 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi6g05106 Pkinase 4.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05106 - - tpra:123889663 1169.84