LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi6g05105	ATGCACAAGCATACAAGTTTGTTAGTTTCTCTGGTTGGTATCTGTATTTTATTGCATGGCATTGATGGTGCATGGATAGAGGAGCCAGGTTCATTGATATTGGGTTGTGGTTTAGATGAAGGAGGAGCCAAAGATACTGATGGAAGACAATGGAGTCCTGATAATAAGTTTTTGGCACCAGACAATGGTTCAATCATGTCTAAAGCTGCATATCAAGAACCTTCCCTCTCCTCTTTGGTTCCATATATGACAGCTAGAGTTTTCACATCAGAAACAACGTACAAATTTAATATTCAAGGCGATAAACGTTATTGGCTCAGGCTCCATTTTTACCCGTCTCTTTACGGCAGTTACAACCCTTCTGATTCATATTTCTCTGTGGCTGCTAATGGGATTACCCTCCTCAGCAATTTCAGTGCTTACATCACTTGTGAAGCGCTATCACAGGCTTACATTGACAGAGAGTATTCTCTTGCTCCTTTGAATTCAGATACTTTGACTCTTACCTTTAAACCTTCTGACAAACAAAAAGGTGCTTTTGCTTTCGTCAATGGCATTCAATTGATCCCGATTCCTGAATTGTTTGACTCTGCTGCATTGGTAGGGTATGTTGAACAAAGAGTAGACGTTAAAAGCTTGAGTTTGCAAACCCTGTTTAGATTAAACGTTGGCGGGCAGTATATGTCTCCAGCCCAAGATTCTGGCCTTTCGAGGATGTGGTATGACGACACGCCTTACCTGTATGGTGCATCCACAGGTGTCACCAACAAAGCTTCCAAGAATGTTCGAATCAACTACCAGACCATGCCACAATACATTGCTCCTGAAACTGTCTACTCAACATCAAGATCAATGGGAACAGATAAGGACGCAAACTTACAATACAACCTCACGTGGGTTTTCCAAGTTGATCCAAATTCCATGTACCTCGTGAGGTTGCATTTCTGTGAATATTATTATTCCAAGGTGAATGAGATTGTTTTCAATATACTTATCAACAACCAAACGGCAGAGTCTCAAGCTGATGTTATTGGGTGGACAGGCGGTAAAGGTGTGCCAACTTATAAGGACTATGTGATATATGTCCAAGACGGGGAAGGGGATGAAAAACTTTGGCTTGCGCTGCAGCCAGCACCTGAGACAAAGCCAGAGTTCTATGATGCCATACTCAATGGGGTGGAGATATTCAAGCTCAACGACACAGACTTGTCTGGCCCCAATCCTCGGCCTTCAGACATGCTTCTAAAAGATCAAGCAGAGGAAAGAGGTTTCCAAACACGCGAAACATATAACAGGAAAGCCGTCATTGGTGGAGCTGCTGGAGGTGCTGCAGGTTTTGCCTTTATGGCAGCAATCTGCATTACTGTCTTCAACAAGAAGAAGAGGGTTCCAGGGTCATCCACAAACACAAGCTGGCTTCCCATATATGGAAACTCACACACAACTGACAGTAAATCCACGTCTGGGAAGAGCATTGCTAGTGCAAACCTTGCTGCCATGTCTCAAGGTCTGTGTCGATATTTTTCCTTACAAGAGATAAAGCAAGCAACCAAAAGTTTTGATGAGTCCCTGGTTATTGGGGTTGGTGGATTTGGAAAGGTTTACAAAGGTATCATTGATAATGGAACGTTAGTGGCAATTAAGAGGTCAAATCCACAATCAGATCAAGGAGTCAATGAATTCCAGACTGAGATTGAGATGCTTTCTAAGTTGAGACACAAGCATTTGGTGTCCTTAATTGGATTTTGCGAGGAAGATAATGAGATGTGTTTGGTTTATGACTACATGGATCTTGGAACCTTTAGGGAACATTTGTATAAAGGTATCAAGCCTTTAAATATTCTAACATGGAAGCAAAGATTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACAGGGGCAAAGTACACCATCATTCATAGAGATGTCAAAACAACAAATATTCTTTTGGATAATAACTGGAATGCCAAGGTATCAGATTTTGGATTGTCAAAAACTGGTCCGGAGATGAACGCTGGCCATGTTAGTACTGTGGTGAAAGGTAGTTTTGGCTACTTGGATCCTGAGTACTTCAGGAGGCAACAATTGACTGAAAAATCTGATGTCTACTCATTTGGGGTTGTCCTGTTTGAGGCTCTATGTGCCAGGCCAGTTCTGAATACTAATCTTCCAAAGGAACAAGTTAGTCTTGCAGAATGGGCTTTGCTCTGCAATCAGAAAGGAACAATAGAGGATATCATTGACCCCAATATCAAGGGAACAATAAATCCAGAAAGCTTGAAGAAGTTTGTGGACACAGCTGAAAAATGTTTGTCCGATCACGGAACTGATCGTCCCTCCATGAATGATTTGTTGTGGAATCTAGAATTTGCTCTCAACCTGCAAGAAAACAAGGATGGCTCAACCCACTCTTCAGCTCGAGTTGATGAAAGTGAGTTTGAAGAAATTAACTTAGAAGACAACAACATGGCAAACCATTATAAAAACCTGAGCCTTGGAAGTGAGTATGACCTTAGCCAAGGTTCTGATTCCGGTAACAGTCCGACTGAAATCTTCTCACAACTTGTTAATTCAGAAGGGAGATGA	2598	0.4199	MHKHTSLLVSLVGICILLHGIDGAWIEEPGSLILGCGLDEGGAKDTDGRQWSPDNKFLAPDNGSIMSKAAYQEPSLSSLVPYMTARVFTSETTYKFNIQGDKRYWLRLHFYPSLYGSYNPSDSYFSVAANGITLLSNFSAYITCEALSQAYIDREYSLAPLNSDTLTLTFKPSDKQKGAFAFVNGIQLIPIPELFDSAALVGYVEQRVDVKSLSLQTLFRLNVGGQYMSPAQDSGLSRMWYDDTPYLYGASTGVTNKASKNVRINYQTMPQYIAPETVYSTSRSMGTDKDANLQYNLTWVFQVDPNSMYLVRLHFCEYYYSKVNEIVFNILINNQTAESQADVIGWTGGKGVPTYKDYVIYVQDGEGDEKLWLALQPAPETKPEFYDAILNGVEIFKLNDTDLSGPNPRPSDMLLKDQAEERGFQTRETYNRKAVIGGAAGGAAGFAFMAAICITVFNKKKRVPGSSTNTSWLPIYGNSHTTDSKSTSGKSIASANLAAMSQGLCRYFSLQEIKQATKSFDESLVIGVGGFGKVYKGIIDNGTLVAIKRSNPQSDQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDNEMCLVYDYMDLGTFREHLYKGIKPLNILTWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDNNWNAKVSDFGLSKTGPEMNAGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNTNLPKEQVSLAEWALLCNQKGTIEDIIDPNIKGTINPESLKKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQENKDGSTHSSARVDESEFEEINLEDNNMANHYKNLSLGSEYDLSQGSDSGNSPTEIFSQLVNSEGR	865

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi6g05105	865	Gene3D	-	213	399	-	-
	Vivi6g05105	865	Gene3D	-	34	190	-	-
	Vivi6g05105	865	ProSiteProfiles	Protein kinase domain profile.	520	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi6g05105	865	Pfam	Protein kinase domain	524	789	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi6g05105	865	MobiDBLite	consensus disorder prediction	842	865	-	-
	Vivi6g05105	865	SUPERFAMILY	Protein kinase-like (PK-like)	498	795	IPR011009	-
	Vivi6g05105	865	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	642	654	IPR008271	GO:0004672\|GO:0006468
	Vivi6g05105	865	FunFam	receptor-like protein kinase FERONIA	481	595	-	-
	Vivi6g05105	865	PANTHER	OS07G0166700 PROTEIN	504	799	IPR045272	GO:0004714\|GO:0006468
	Vivi6g05105	865	Pfam	Malectin-like domain	35	397	IPR024788	-
	Vivi6g05105	865	SMART	serkin_6	520	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi6g05105	865	Gene3D	Phosphorylase Kinase; domain 1	479	595	-	-
	Vivi6g05105	865	FunFam	FERONIA receptor-like kinase	31	192	-	-
	Vivi6g05105	865	Gene3D	Transferase(Phosphotransferase) domain 1	596	818	-	-
	Vivi6g05105	865	FunFam	Receptor-like protein kinase FERONIA	596	809	-	-
	Vivi6g05105	865	FunFam	FERONIA receptor-like kinase	213	399	-	-
	Vivi6g05105	865	ProSitePatterns	Protein kinases ATP-binding region signature.	526	548	IPR017441	GO:0005524
	Vivi6g05105	865	CDD	STKc_IRAK	526	793	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi6g05105	Vivi-Chr6	155197452	155200402	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi6g05105	32	865	Receptor kinase-like Gene Family	AT3G51550	52.124	0.0	832

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Vivi6g05105		Malectin_like	3.8e-38	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi6g05105	-		-	tpra:123889663	1525.38