Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05062 ATGGGAAAGGCAAGCAAATGGATTAGAAATCTTCTTCTTGGGAAAAAAGAAGAGAACTTCAAGCAGATTGATACTTTCTGCTCGGAGAATAAGGCAGCGAACGCGGTCAATAATAGCGGTAGTAATAAAATGGTAGTGAAGCGAAAATGGAGCTTCCGAAAACTGACAGGTGGAAGATCAACTGGAAAGATAATAGCTCATAAAGTTTCCCAGTCTTTTGACTCAATTGATTCTCCGAAATTGCAAATTCAAGCCTTAATGTTCCAAACTCAGACTCCAAGAACAGCTGCTGAATTTGTAAGAAGAGCTGCTACAAGGATTCAAGCTTCCTTTCGCTCCTATTTGGCAAGGAGGGCACTGCATGCTTTAAGAGGCTTAGTGAAGTTACAAGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACCGCAACACTGCGAGGGATGCACGCGTTGATGTCCATACAAGTTCGAGCTCGAATCAAAAGGATTAAGATGGCCGAAGAAGAAGTAAATCCACTCGAAATACAACAACCTCCACAACACACCGAAGTTCCTTACTTCAAACATCACAAGACACAACAAAGACAATATCAAGATTCGAAGAATATGAGTGTGGAAGAAATGTTGGGAGTAATGAGAAGTAGAAGCGGTCCTCTAGATGTAAAAAGCAGAAAGTATGATTCAATGGCATATTATTCAAATCAATTGAAGAAGGAGAATAATCACAATAATACTACAAAAGTCATCACAGAACCAAACAGTCCAGAAAAATACTTCAAAGAAATGATCGATTATTTGAAGCCGACAACATCTCAGCGTGACATGGTACCTCCTAGACAATCATGGTCATCACCGAATTACATGAACAAGACGGAATCATCAAAGGCAAAAACAAGGTCTAGTAGTGAACCGAGACAAAGACCAAAACTAGGAACAAAGCAAAAGAGTGGCAAGAGTGTAGAAGGTGGTGGTTTGTTGAAGCATAATATGTTGTCACATTCAGCAAGGTATGATCATTGGATTGTTAATTCGATGAAGGAGAGTAAACGAGATTCTTTTGATAGCTGCAGGGTTACTACTAGTGATGATTCGTACTACATGTGA 1107 0.3993 MGKASKWIRNLLLGKKEENFKQIDTFCSENKAANAVNNSGSNKMVVKRKWSFRKLTGGRSTGKIIAHKVSQSFDSIDSPKLQIQALMFQTQTPRTAAEFVRRAATRIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRIKMAEEEVNPLEIQQPPQHTEVPYFKHHKTQQRQYQDSKNMSVEEMLGVMRSRSGPLDVKSRKYDSMAYYSNQLKKENNHNNTTKVITEPNSPEKYFKEMIDYLKPTTSQRDMVPPRQSWSSPNYMNKTESSKAKTRSSSEPRQRPKLGTKQKSGKSVEGGGLLKHNMLSHSARYDHWIVNSMKESKRDSFDSCRVTTSDDSYYM 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05062 368 Gene3D - 97 169 - -
Vivi6g05062 368 MobiDBLite consensus disorder prediction 297 311 - -
Vivi6g05062 368 ProSiteProfiles IQ motif profile. 101 128 IPR000048 GO:0005515
Vivi6g05062 368 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Vivi6g05062 368 SMART iq_5 122 143 IPR000048 GO:0005515
Vivi6g05062 368 SMART iq_5 99 121 IPR000048 GO:0005515
Vivi6g05062 368 MobiDBLite consensus disorder prediction 270 326 - -
Vivi6g05062 368 Pfam Protein of unknown function (DUF4005) 255 336 IPR025064 -
Vivi6g05062 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 142 IPR027417 -
Vivi6g05062 368 PANTHER IQ-DOMAIN 5-RELATED 1 321 - -
Vivi6g05062 368 Pfam IQ calmodulin-binding motif 127 141 IPR000048 GO:0005515
Vivi6g05062 368 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Vivi6g05062 368 MobiDBLite consensus disorder prediction 274 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05062 Vivi-Chr6 154897515 154899578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05062 1 319 IQD Protein Family AT4G14750 35.795 1.03e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05062 - - psat:127129486 645.195