Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05051 ATGAATGGTGTAACACACCTTGAAACTGATGATGACTCAGATTTTGTTGAAGTTGATCCAACCGGTAGATATGGCAGATACAATGAAATTCTTGGTAAAGGAGCTTCTAAAACAGTGTATGAATACAAACCCATTTTTGTTTTTCACTTTTTTATCATACCCATTTCTTATTTTTCTTTAAAAAAATGTTTTTTTTATGTTTGTTTTTTTAAAATTTTTTTGGTTTGGTTCAATTTATGTAGATATAGAGGATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAATCAAATCAAACTATATGATTTTCTACAAAATCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTTCTCAAGACATTGAAACACAGAAACATAATGAAATTCTATACTTCTTGGGTTGATACTGCAAATAGGAATATCAACTTTGTTACTGAGTTGTTTACTTCCGGTACTCTTAGACAGTATAGGTTAAAGCACAAGAAGGTTAACATTAGAGCAGTGAAGCATTGGTGTAGACAGATCCTGCAAGGACTTCTGTATCTTCATAGTCATGATCCACCTGTGATTCATAGAGATCTCAAATGTGATAATATTTTCATTAATGGTAATCAAGGGGAAGTTAAGATTGGGGATCTTGGTTTGGCTGCGATTCTCCGGAAATCACATGCTGCTCATTGTGTAGGAACACCTGAGTTCATGGCGCCAGAAGTATATGAAGAGGAGTATAATGAATTAGTTGACATATATTCCTTCGGTATGTGTGTGTTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGCAGCCATCCGGCACAAATCTACAAGAAAGTTTCTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCCGAAACGCGAGAGTTTGTTGAGAAATGCCTCGCGACAGTGTCCCTAAGGCTCTCTGCAAGGGAGCTTCTTGACGATCCTTTTCTTCGAATTGATGATTACGAATATAATTTGGGATCGGTAGATGTTGAAGAGTTTGTTGACTTGGGTCCTCTTGTTAGTCAATCATTCTTTTCACTCGATCGTAGCTATAGTAACATAAGTACCGAATACTCAAATGGTTTCGGGTATGAAGCAGATTGTTATTCTCATCCGGCTGAGATTGAACACGGAATTGAACTTTTCGAGTGCCAAGACGATGAAACCTCCAAAGATGTTGACATAAGCATCAAAGGCAAGAGGAAAGACGACGGTGGCATTTTTTTGAGACTAAGAATTGCGGACAAAGAAGGTCGTATCCGAAACATTTATTTCCCGTTTGACATAGAGTTGGATACAGCATTAAGTGTAGCAACTGAAATGGTTGCAGAACTTGACATTACCGATCAAGACGTTACCAGTATAGCCGGTATGATAGATGGAGAAATCGCTTTGTTAGTGCCTAAATGGAGGCGAGGACCGGGAATTGAGGAAACCACTGACTATGCAAATCAAAGTTTCTGTGAGAATTGTGTGTCGAATCATACTACAGTTACGGATTTTCTTTCCCGTAATCAAAGTGGAAAAAACTTGCAGCTTCTTCAATGCTGCATGCATGGATGTGCTTCAATGCACGGCCGTTTCGAAGAGATTACATTCCAATCCGAGGAGTATGACAACAATGTCAACGAGGATGCGCCTAACATGTCAAGCGAATCCGACTTTTTGCAGTATCAGGAATCGTGGAGTCATCATCACGAAAGCCGCGAACTGAGTCCAGTAGAATCTACTACTCGAAGCCCTTCAGACGAACATTACGAACTAGGAAACCATTATTTACCGACTATCGGTTCACTACATTGCGGAGCTGAGAATGATTACGAGAAAGAGATACAACACGAGTTGAGATGGCTCAAAGCAAAATATCAAATGGAGTTAAGGGAACTTAGGGATAAACAAATGGGACTAGAAGCAAAATCGCCGCACTCAAGTAGCAACATAAAGCATGAAACAACATCAGAAACAGTAAACAGATTCGAGAATGAGATTCACTTTGATAATCACAGGGATTACGATTCCAGCTACGGTTTTCGAGAACACAAGAGCCAACCCAATTCGGAGACTCGAAGGGCCCAAAATTGCGGCGCGATGTATTGTGATGAAGAAAGTATTGCTACAGCAAAGAGTTTCTACACAAGGATGTTGATTCCAGATACTATACACAGAACTGTTTCACTTCCTGTTGATGCTGTGGATGTATAA 2226 0.3917 MNGVTHLETDDDSDFVEVDPTGRYGRYNEILGKGASKTVYEYKPIFVFHFFIIPISYFSLKKCFFYVCFFKIFLVWFNLCRYRGFDEYQGIEVAWNQIKLYDFLQNPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFTSGTLRQYRLKHKKVNIRAVKHWCRQILQGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEEYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVSSGKKPDALYKVKDPETREFVEKCLATVSLRLSARELLDDPFLRIDDYEYNLGSVDVEEFVDLGPLVSQSFFSLDRSYSNISTEYSNGFGYEADCYSHPAEIEHGIELFECQDDETSKDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIELDTALSVATEMVAELDITDQDVTSIAGMIDGEIALLVPKWRRGPGIEETTDYANQSFCENCVSNHTTVTDFLSRNQSGKNLQLLQCCMHGCASMHGRFEEITFQSEEYDNNVNEDAPNMSSESDFLQYQESWSHHHESRELSPVESTTRSPSDEHYELGNHYLPTIGSLHCGAENDYEKEIQHELRWLKAKYQMELRELRDKQMGLEAKSPHSSSNIKHETTSETVNRFENEIHFDNHRDYDSSYGFREHKSQPNSETRRAQNCGAMYCDEESIATAKSFYTRMLIPDTIHRTVSLPVDAVDV 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05051 741 Gene3D Phosphorylase Kinase; domain 1 8 45 - -
Vivi6g05051 741 Gene3D Phosphorylase Kinase; domain 1 70 148 - -
Vivi6g05051 741 FunFam Probable serine/threonine-protein kinase WNK1 77 148 - -
Vivi6g05051 741 FunFam probable serine/threonine-protein kinase WNK9 150 329 - -
Vivi6g05051 741 CDD STKc_WNK 23 324 - -
Vivi6g05051 741 Pfam Protein kinase domain 86 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05051 741 Gene3D Transferase(Phosphotransferase) domain 1 150 329 - -
Vivi6g05051 741 Coils Coil 627 647 - -
Vivi6g05051 741 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 416 469 IPR024678 GO:0004674|GO:0005524
Vivi6g05051 741 SUPERFAMILY Protein kinase-like (PK-like) 82 325 IPR011009 -
Vivi6g05051 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Vivi6g05051 741 Gene3D - 413 498 - -
Vivi6g05051 741 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g05051 741 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 659 - -
Vivi6g05051 741 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05051 Vivi-Chr6 154781141 154784579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05051 1 642 MAP Kinase Kinase Kinase AT3G22420 48.336 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Vivi6g05051 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05051 K08867 - gmx:100775959 1016.91