Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05045 ATGGCTTCATCACCATTACTATTCACAGTGAGGAGGTTCCAACCAGAGTTGGTGCAACCAGCAGCTTCCACTCCTCGAGAAGTTAAACTACTGTCTGACATAGATGATCAACAAGGTTTACGTTTCAATATTCCTTTCATATTTATCTATCGCCACGAACCATCAATGGCAGAAAAAGATCCGGTAGAAGTTCTTAGAAATGCACTCTCACAAACACTTGTGTATTACTATCCATTTGCGGGAAGGATTAAAGAGGGGGTTGGACGAAAGTTGATGGTTGATTGTACTGGTGAAGGTGTCATGTTCGTTGAAGCTGAAGCTGATATAACACTTGATCAACTTGGTGACTCTCTCCATCCACCATTCCCTTGCTTCCAAGAACTTCTCTATGATGTTCCTGACTCAGAACTAATTATTGATCGCCCCTTTCGACTCATACAAGTGACACGTCTAAGGTGTGGTGGCTTCATAGTGGCAATAAATTTGAACCATACAATGAGCGATGGAACTGGTATCAGACAGTTCTTGGATGCATGGGCAGAAATGGCTCGAGGAGCATATCAACCTTCGATTCAACCTGTGTGGCGTAGAGAGATCCTCATGGCAAGAGATCCACCATGCATTACATACCACCATCGTGAGTACGAACAAATACTTCCACCATATAATACTATCAAGGAAGAAGATACTACTAACATAGTCCATCAATCTTTCTTCTTTAAACCTTCAGACATAGCTACAATTCGTCTCTTGGTTCCATTTCAATGTACCACATTCGATATTATCACTGCTTGTTTTTGGTACTGCCGCACAAAAGCATTGCAGTTAGAGCCAGAAGAAGAAGTACGAATGATGGTCATCGTTAATGCACGTTCGAGGTTTAACAATAATCATTCTACCCCACTAATTGGATATTACGGTAATTGTTTTGCTTATCCAGCAGCTGTCACTACCGCAGGGAAGCTTTGCGGAAATTCACTAGGATATGCAGTTGAGTTGATAAGAAAAGTAAAAAGTGAAGTTACAAAGGAATACATACAATCTGTAGCAGATCTTATGGTTATTAAGGAACGATGCTTATTTACAACGGTAAGATCGTGTATTATTTCAGATTTGACTCGAGCTAAATTTAGAGAAGTAGATTTTGGATGGGGTGAAGGGGTGTATGGTGGAGTCGTAAAAGGTGGGGCAGGACCTTTTTTAGGTGTAACTTACATAGTTCCACATAAGAGTACAAAAGGAGAAGATTGTTTCATGTTACCAATTTGTTTGCCTTCTCAAGTAATGAAGAGGTTTGCTAAAGAGTTAGATCAGATTCTTGGTAGTCAAAATTAA 1335 0.4015 MASSPLLFTVRRFQPELVQPAASTPREVKLLSDIDDQQGLRFNIPFIFIYRHEPSMAEKDPVEVLRNALSQTLVYYYPFAGRIKEGVGRKLMVDCTGEGVMFVEAEADITLDQLGDSLHPPFPCFQELLYDVPDSELIIDRPFRLIQVTRLRCGGFIVAINLNHTMSDGTGIRQFLDAWAEMARGAYQPSIQPVWRREILMARDPPCITYHHREYEQILPPYNTIKEEDTTNIVHQSFFFKPSDIATIRLLVPFQCTTFDIITACFWYCRTKALQLEPEEEVRMMVIVNARSRFNNNHSTPLIGYYGNCFAYPAAVTTAGKLCGNSLGYAVELIRKVKSEVTKEYIQSVADLMVIKERCLFTTVRSCIISDLTRAKFREVDFGWGEGVYGGVVKGGAGPFLGVTYIVPHKSTKGEDCFMLPICLPSQVMKRFAKELDQILGSQN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05045 444 Gene3D - 219 437 IPR023213 -
Vivi6g05045 444 Gene3D - 9 217 IPR023213 -
Vivi6g05045 444 Pfam Transferase family 13 436 - -
Vivi6g05045 444 PANTHER ACYL TRANSFERASE 4 8 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05045 Vivi-Chr6 154670010 154672995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05045 17 439 Monolignol Biosynthesis Gene Families AT5G48930 28.153 9.04e-47 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05045 K19861 - gmx:100787907 565.844