Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05042 ATGGCAAAGGTGGATCTGTCTGGGATATCTCTGAGGCCATTCAAGCTAACAGACGTTGACGGTTTCTTCTTATGGGCAGGTGACAACGAGGTAACCAAAAACATCCGATGGAAAACATGTTTATCAAGAGAAGAAGCTCTAACATTCATCAAAGATGTCTGCATACCTCACCCATGGCGCCGATCTATCTGTCTCGACGATCGTTCCATCGGTTTCGTTTCTGTATATCGTTGGTCGGGTGATGATAGATGCAAAGCTGACATAGGTTATGCTGTTGCTGCTAACTACTGGGGACATGGAATAGCCACAAAAGCAATCAAGATTGCTCTGTCACATGTGTTTAATGATTTTTCTGATTTGTTAAGGTTGCAGGCTTTTGCTGATGTGGATAATAAGGCTTCTCATAGAGTTTTGGAAAAGGCTGGGTTTGTTAGAGAGGGTGTTCTTAGAAAGTATACTTTTATCAAAGGTAGTATTAAGGATTTAGCAGTGTTTAGTTTCTTGTCAACAGATGAAATTCCTCACGTTGACTAG 534 0.4139 MAKVDLSGISLRPFKLTDVDGFFLWAGDNEVTKNIRWKTCLSREEALTFIKDVCIPHPWRRSICLDDRSIGFVSVYRWSGDDRCKADIGYAVAANYWGHGIATKAIKIALSHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFVREGVLRKYTFIKGSIKDLAVFSFLSTDEIPHVD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05042 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 171 IPR000182 GO:0016747
Vivi6g05042 177 Pfam Acetyltransferase (GNAT) domain 10 143 IPR000182 GO:0016747
Vivi6g05042 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 172 - -
Vivi6g05042 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
Vivi6g05042 177 Gene3D - 6 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05042 Vivi-Chr6 154542642 154543299 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi6g05042 Acetyltransf_3 2.8e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05042 - - gmx:100527210 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05042 6 154542642 154543299 Vivi6g05042 6 154542642 154543299 ECH