Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05041 ATGGCAAAGGTGGATCTGTCTGGGATATCTCTGAGGCCATTCAAGCTAACAGACGTTGACGATTTCTTCTTATGGGCAGGTGACAACGAGGTAACCAAAAACATCCGATGGAAAACATGTTTATCAAGAGAAGAAGCTCTAACATTCATCAAAGATGTCTGCATACCTCACCCATGGCGCCGATCTATCTGTCTCGACGATCGTTCCATCGGTTTCGTTTCTGTATATCGTTGGCCGGGTGATGATAGGTGCAAAGCTGACATAGGTTATGCTGTTGCTGCTAACTACTGGGGACATGGGATAGCCACAAAAGCAATCAAGATTGCTCTGTCACATGTGTTTAATGATTTTTCTGATTTGTTAAGGTTGCAGGCTTTTGCTGATGTGGATAATAAGGCTTCTCATAGAGTTTTGGAAAAGGCTGGGTTTGTTAGAGAGGGTGTTCTTAGAAAGTATACTTTTATCAAAGGTAGTATTAAGGATTTAGCAGTGTTTAGTTTCTTGTCAACAGATGAAATTCCTCACGTTGACTAG 534 0.4176 MAKVDLSGISLRPFKLTDVDDFFLWAGDNEVTKNIRWKTCLSREEALTFIKDVCIPHPWRRSICLDDRSIGFVSVYRWPGDDRCKADIGYAVAANYWGHGIATKAIKIALSHVFNDFSDLLRLQAFADVDNKASHRVLEKAGFVREGVLRKYTFIKGSIKDLAVFSFLSTDEIPHVD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05041 177 Gene3D - 6 173 - -
Vivi6g05041 177 Pfam Acetyltransferase (GNAT) domain 10 143 IPR000182 GO:0016747
Vivi6g05041 177 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 172 - -
Vivi6g05041 177 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
Vivi6g05041 177 CDD NAT_SF 63 123 - -
Vivi6g05041 177 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 171 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05041 Vivi-Chr6 154527675 154528366 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi6g05041 Acetyltransf_3 1.3e-23 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05041 - - gmx:100527210 291.582