Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05035 ATGGAGATTGAAAGAGTTTCTAGAGAAACCATCAAACCTTCATCACCAACTCCTTGTCACCTTAGAATATATCCACTTTCTTTTATAGATAACATGTTTGTTTGTAATGTTCCACTACTCTTGTTTTACAACCCAGACAAGAGTAATGACCAATTTTCAAAAATATCACAACTCAAAAGATCATTATCTCATGTTCTATCCAAATACTATATTTTTGCTGGCAGGTTGAAAGATAGAATTACTATTGAATGTGAAGATCAAGGTGTGCCGTTTTTGGTGACAAAGATAACAAATAAACTATCAGATATCCTCCAACACCCAGAAGAAAAATTGTTGAACTCTTTGTTCGCTGACGGGTTGCAATGGAAAGACGCAGATTCGAGTGTTGCTTTAGTAGCCATTCAAATTAATTGTTTTGAATGTGGAGGAATGGCTATAAGTATTTGCATGAATCACAGATGTGGAGATGCTTCCACACTTATTAATTTCATGAAGGAATGGGCTATCATCAATAAAAAATTACAAGAAGAAGAAAATGGAGAAGAATTATTAATAGTACCATTTCCTTTACTTGAGGGAGGAGCTTCAATTTTCCCACAAAAAAACTTACCTATTTTCCCACAATCTGTTCTTAATAGACAAAAGAATATGATAGGTAAACGATTTGTATTTCAACCAAAAATAATTAATTTTCTCAAGGAATTGGCAAGTTCTAGTTATGTACTTTATCCCTCGCGAGTCCTAGTTGTAAAAGCTTGGATTTACAAGCACGCGGTTTCATCAATGGGATTAAATTTCAAGACATCGTCGTTTCAAATGGCCGTAGATCTTCGCAAAAGAATGATACCTCCGTTGTCTGAAAAGTGTGTGGGAAATATAGTTTGGATGTCATCTATGATCGCTGATAAGGAGGAAATGGAGTTGAAAGATGTAGTATGCAAAATCAAACAAGGGTTGTGTGAATTTTGTGACATTTATCCAAAATTATTTGGAGGGAATAATTTTTCGTTGTTATCCGAGTTCATGAATAAAATTATTGATCTCAAATCTAAGAAAAAAGATGGGATTGGTTTTAGTAGTTGGTGTAATTTTGCAGTATATGAAGTAGATTTTGGATGGGGAAAACCAACATGGGTTACTACTTGTGGTTGTCCTTGGAAGAATTTCGTAATTCTGATGGATAGAAAAGATGGAAACGGGATTGATGCAATAGTGAGCTTGGAAGAGAATCATATGACTAAATTTGAGCATGAATATGTGGAGCTTCTTCGATATGCTTCTCCTAAGTTGTGA 1293 0.3457 MEIERVSRETIKPSSPTPCHLRIYPLSFIDNMFVCNVPLLLFYNPDKSNDQFSKISQLKRSLSHVLSKYYIFAGRLKDRITIECEDQGVPFLVTKITNKLSDILQHPEEKLLNSLFADGLQWKDADSSVALVAIQINCFECGGMAISICMNHRCGDASTLINFMKEWAIINKKLQEEENGEELLIVPFPLLEGGASIFPQKNLPIFPQSVLNRQKNMIGKRFVFQPKIINFLKELASSSYVLYPSRVLVVKAWIYKHAVSSMGLNFKTSSFQMAVDLRKRMIPPLSEKCVGNIVWMSSMIADKEEMELKDVVCKIKQGLCEFCDIYPKLFGGNNFSLLSEFMNKIIDLKSKKKDGIGFSSWCNFAVYEVDFGWGKPTWVTTCGCPWKNFVILMDRKDGNGIDAIVSLEENHMTKFEHEYVELLRYASPKL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05035 430 Gene3D - 1 204 IPR023213 -
Vivi6g05035 430 PANTHER F21J9.9 5 427 - -
Vivi6g05035 430 Gene3D - 214 426 IPR023213 -
Vivi6g05035 430 Pfam Transferase family 1 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05035 Vivi-Chr6 154473334 154474626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05035 1 416 Monolignol Biosynthesis Gene Families AT5G48930 22.000 4.08e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05035 - - vvo:131607968 473.781