Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05027 ATGGCAGTGGATTTTTTGTCAAGAATCACTCTGCGGCCATTCAAGTTAAGCGACGTGGACGGTTTCATGTTGGTAACAGGCGATGATAGAGTAACAAACTTCACTAGAAGGAAATCTTTTGTTTCAAGGGAACAAGCTTTAAACTATATCCAAGATGTATGCATTCCTCACCATTGGACACGTTCCATATGCATTGACGATAAAACTATTGGATTCATATCCATTTCTCCAGGTGGATCTGGTGACCATGGTCATGATGATGACAGGTGTAGGGCTGAGATAGGCTATGCTGTAGCTGCAAACTACTGGGGTCAAGGGATTTGCACCAAAGCTGTTAAGGTTGCTGTGTCACAAGTTTTCAAGGATATTCCTTGTTTGGTAAGGTTGCAAGCTTTTGTTGATATGGAGAATCAAGCTTCACAGAGGGTTTTGGAAAAGGGTCTCTGA 447 0.4228 MAVDFLSRITLRPFKLSDVDGFMLVTGDDRVTNFTRRKSFVSREQALNYIQDVCIPHHWTRSICIDDKTIGFISISPGGSGDHGHDDDRCRAEIGYAVAANYWGQGICTKAVKVAVSQVFKDIPCLVRLQAFVDMENQASQRVLEKGL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05027 148 CDD NAT_SF 63 121 - -
Vivi6g05027 148 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 148 IPR000182 GO:0016747
Vivi6g05027 148 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 146 IPR016181 -
Vivi6g05027 148 Gene3D - 3 147 - -
Vivi6g05027 148 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 146 - -
Vivi6g05027 148 Pfam Acetyltransferase (GNAT) domain 8 146 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05027 Vivi-Chr6 154361592 154362940 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi6g05027 Acetyltransf_3 2.9e-19 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05027 - - vvo:131610631 278.87