Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05024 ATGGAGTGCAACAAGGATGAGGCTCTGAGGGCAAAAGAAATTGCTGAGAATAGATTGCAGACTAGTGACTTTGCAGGGGCACTGAAGTTTGCTATGAAAGCTCGGCGACTGTTTCCTGATACCCAGAACATCACTCAGATCATTACTATTTGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCTACGTCTGATATGGACTGGTATGGAATTCTTCTAACTGATAAATTTTCTGAAGAAGCAGCGATAAAGAAACAGTATAGAAAACTTGCACTGCAACTTCATCCTGATAAAAATAAATTCGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCTAACAGAGTATTAAGTGACCCAGCAAAGCGTTCTTTATATCACATGAAGATTAGCCGCCTTGCAGGAATTAAAGCACCTCAGGCTCCATCCCATCACCATAATAGTTTTCATGCACAGTTCCATTCTCAAAATTCGAATTCGAATAAGCAGGAGACATTTTGGACATCATGCCAACATTGTAATACTAAGTACGAGTACTACAAAAACATTATAAATGCTACCTTGCATTGTCGACAATGTCTTAAACTCTTCAAAGCTCGCGATATAGGGTCGCCGGTTGCACCGTCAGGACATACATCATCATTTTACAGAAATAAAGATATTCCAAACCACATGCCACCAAAAGAAGCATCACAAAGTAATGGTGGAAAACCTTATGGTAAAGGACCGGAGGACATGTTTGTGCCCCTTCGTCCTGAATCTACGACAAAACATGGGGCTGGAGAAGGGGCCTCTTCTAAGGTTCGAAAGAGTAAAGATGGCCATGGTACTGCTGGTGTGACAAAGGCTGCTGCTGGAACTTCCAACCGTGCTACATCTAAGGCCAAGCCCCCACGGACCCAAACAAATGTTGGAAGTAAGAGAGCAAGGCAGTCAGCATCAGCAGATTCAGTTGATGGAAATGGCATGAAATATAGCAATGTTCAAGAAAATGGTGTTGATCCTTCTGGACTTGACACAGGAGTCCATTCTAAGAAATCTTCCAGGAAAAAGCAGCACGCTTCATACACAGAAACTGCTAGAGATGGTGAGTTTGAGAATGCTTCCAAAAGGCCACGACAAGATGAATCTTCTAAGACCACTAAAGTGGAGAGAAGAGATGGGCCTTCAAATGGTGGGTTGTTCAATAAGACAAGTTCAACTAGTTTCACTGCTGATGTGGCTGGTCAGAATGGAGAGACGAGAAACAAAACAAATGGCCAACCTGAAAAAACAGTTTTAAGGAATAAAATGAAAGTTGAGCAATCGAACTCGAAAAGAAAGGAGACATCCAATCCCGATATTATATTATGTCCTGATCCAGAATTCAGTGATTTTGATAAGGTTAGAGCAAAGGATTGTTTTGCTGCTGATCAATACTGGGCTATTTATGATGATACTGATTCTATGCCAAGATTCTATGCTCGCATCAAGAAGGTTCACTCCCCTTTCAAACTGGAATATACTTGGCTGGAACCAAATCCAGATCTCAAAGATGAGATAGAATGGCATGAAGCAGATTTGCCTATTGCGTGCGGTAAGTACAGACGTGGAAGTACTCAGACAACTGGAGATATTGATATATTCTCTCACATGGTGCATTGTATAAAAGGGAGGGCTAGAGGTTCTTATTTGGTATATCCCATGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATATAGGATGGGGTTCTAAACCTGAAAAGAATGCAGAATATCAATTTGAATTTGTGGAAGTCCTTGCTGATTTTGATGAGAAAGATGGTGTTAAAGTTACTTATCTGAGCAAAGTGAAAGGGTTTCTTTGTCTCTTTCAGCAAACTGTGCAGAATGGAGTTGGATTATTTTATGTTCCACCTAATGAGTTGTATAGGTTTTCACACCGAGTTCCTTCATTTATGATGTCTGGTGATGAAAGGAAAGATGTTCCAAAAGGATCATTTGAACTTGACCCTGCTGGCCTGCCTAAGAGTGTTTTTCAGGTTCAAGTTGGCGATCCGGGTGATGTGATGGAGGATGGAATGTTAAACAATGGAGTCAGTTCTTGCAAGGAATCCTCCAAGCGTAAAGTTGATCAGGCAAAGTGTAACGAGAGTATTCCCAAAGCAAAATTGCGAGAAAGTGGTGGTCTTGAAAGAGTTCAACCTATCAATAGAAAGTGGTGGTCAAACGCAGAAAATATGGGCAATGGTCATACAAGTACTAGTCAACATATGGTCAGAGAACACGATAAGAACACTAGTCACAGGGACTACAGTCAACCGGAAGGAAATGAAGCTGCTGCAAGCCAGACCAACAAGAATTTCAAGACACCACAGAAACCCAACAAGAGAAATTATCACGCGGAGACATCGACAGTTCGAAGGTCACCTAGAGATTTAAGCAAGAAAAATGATGCAAGAGGCGCTGGTGAATGTGCCACTAGCAAGTTGGCTGATAATCATTCCAACACTAACAATAATATTAAGGAAACTGTGTTTTCTCAGTCGGTGGGAAGTGATCACGCGTGCTTGAAAAAAGAATCCGGAGTTGTGGGAGCAAGTTATGACTTTAATAAGGAAAAATCTAGGGAGATGTTTCGGTTTGGTCAGATATGGGCAATATACGGTGATAGAGATAATATGCCTGTTGTTTATGTTCAAATCAAGAAGATTGAATCCACCTCTAATTTTAGGTTGCATGTATCCGAACTTGAACCCTGCTCGCCCCCAGAAGGTTTCCAGCGAGCAATATCCTGTGGTTCCTTCAAAATAAAAAAAACCAAACCCCAAATTCTCTCTCCCTCAGCATTCTCTCATCAACTAAAAGTTGAACCCATGGAAAACAGTATATATGAAATTTACCCTAAAAAAGGTGAGATTTGGGCTCTATACAAGGACCATAACTATGAACTTACTTCTTCAGACCAGGACAGAGGCAGAAGTGAATGTCATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATAGAAGTTGTTATTCTGTTGCGTTTTAGCGGTTCTCAGCCAATTTTCAAGGCTCCCATTACGCGGCGATCTAAGACCGGTATAATTGAAATATTAAGAGAAGATGTTGGTAGATTTTCACATCAGGTTCCTGCTTTTCAGCATACTGGAGAAGACGATCTTCATCTCAGAGGGTGTTGGGTGGCAGATCCGTCTTCAATTCCTGGTTTTGCAGTATAG 3231 0.4138 MECNKDEALRAKEIAENRLQTSDFAGALKFAMKARRLFPDTQNITQIITICEVHCAAQNKLSTSDMDWYGILLTDKFSEEAAIKKQYRKLALQLHPDKNKFAGAEAAFKLIVEANRVLSDPAKRSLYHMKISRLAGIKAPQAPSHHHNSFHAQFHSQNSNSNKQETFWTSCQHCNTKYEYYKNIINATLHCRQCLKLFKARDIGSPVAPSGHTSSFYRNKDIPNHMPPKEASQSNGGKPYGKGPEDMFVPLRPESTTKHGAGEGASSKVRKSKDGHGTAGVTKAAAGTSNRATSKAKPPRTQTNVGSKRARQSASADSVDGNGMKYSNVQENGVDPSGLDTGVHSKKSSRKKQHASYTETARDGEFENASKRPRQDESSKTTKVERRDGPSNGGLFNKTSSTSFTADVAGQNGETRNKTNGQPEKTVLRNKMKVEQSNSKRKETSNPDIILCPDPEFSDFDKVRAKDCFAADQYWAIYDDTDSMPRFYARIKKVHSPFKLEYTWLEPNPDLKDEIEWHEADLPIACGKYRRGSTQTTGDIDIFSHMVHCIKGRARGSYLVYPMKGETWAIFRHWDIGWGSKPEKNAEYQFEFVEVLADFDEKDGVKVTYLSKVKGFLCLFQQTVQNGVGLFYVPPNELYRFSHRVPSFMMSGDERKDVPKGSFELDPAGLPKSVFQVQVGDPGDVMEDGMLNNGVSSCKESSKRKVDQAKCNESIPKAKLRESGGLERVQPINRKWWSNAENMGNGHTSTSQHMVREHDKNTSHRDYSQPEGNEAAASQTNKNFKTPQKPNKRNYHAETSTVRRSPRDLSKKNDARGAGECATSKLADNHSNTNNNIKETVFSQSVGSDHACLKKESGVVGASYDFNKEKSREMFRFGQIWAIYGDRDNMPVVYVQIKKIESTSNFRLHVSELEPCSPPEGFQRAISCGSFKIKKTKPQILSPSAFSHQLKVEPMENSIYEIYPKKGEIWALYKDHNYELTSSDQDRGRSECHIVEVLADSDKSIEVVILLRFSGSQPIFKAPITRRSKTGIIEILREDVGRFSHQVPAFQHTGEDDLHLRGCWVADPSSIPGFAV 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 737 751 - -
Vivi6g05024 1076 SUPERFAMILY Chaperone J-domain 61 129 IPR036869 -
Vivi6g05024 1076 SMART dnaj_3 66 123 IPR001623 -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 283 335 - -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 428 442 - -
Vivi6g05024 1076 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 752 767 - -
Vivi6g05024 1076 CDD DnaJ 67 120 IPR001623 -
Vivi6g05024 1076 Gene3D DnaJ domain 64 177 IPR036869 -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 737 833 - -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 768 795 - -
Vivi6g05024 1076 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vivi6g05024 1076 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vivi6g05024 1076 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vivi6g05024 1076 Pfam Domain of unknown function (DUF3444) 864 1055 IPR024593 -
Vivi6g05024 1076 Pfam Domain of unknown function (DUF3444) 449 654 IPR024593 -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 352 387 - -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 207 450 - -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 796 815 - -
Vivi6g05024 1076 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1072 - -
Vivi6g05024 1076 MobiDBLite consensus disorder prediction 393 426 - -
Vivi6g05024 1076 Pfam DnaJ domain 67 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05024 Vivi-Chr6 154341670 154347562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05024 4 243 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.259 5.45e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05024 - - mtr:11432260 1576.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05024 6 154341670 154347562 Vivi6g05024 6 154341670 154347562 ECH
Vivi6g05024 6 154341670 154347562 Vivi1g05706 1 125658912 125661681 PCT