Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04981 ATGAAACCACGGTCCACCGTCAATCAATGGAGCCACGGTGTTCTCTGGAGGTCACCTTTCTCCCTTCGCCCTCAGATCAGAGCTGTCGCTCCTTTCATCGAACAATTCCACCGCAAGATCGCCTCCTCCGCTGGTGAAAATCCTTTCAAGGGACACTTGACTAGTCTACCCAAGCCCGGTGGTGGTGAATTTGGAAAGTTCTACAACCTTCCTTCTCTCAATGATCCGAGAATTGAAGGGGTATCGGCAGTGGTTGATGTGTCGATAGATACCTTCAAAGAAACTTCTTCTGGCGGTGCACCTACTTTTCATAACTGTAGGAGGCTCCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTTGATAGTTTAACTTTAACCAATTAA 399 0.4712 MKPRSTVNQWSHGVLWRSPFSLRPQIRAVAPFIEQFHRKIASSAGENPFKGHLTSLPKPGGGEFGKFYNLPSLNDPRIEGVSAVVDVSIDTFKETSSGGAPTFHNCRRLPSGCVVQDMPNGYSKVDSLTLTN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04981 132 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 79 125 IPR042160 -
Vivi6g04981 132 Pfam START domain 80 128 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04981 Vivi-Chr6 153815242 153816800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04981 79 125 Homeobox Transcription Factor Family AT3G61150 68.085 2.61e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04981 K01681 - vvo:131615040 276.944