Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04945 ATGCCGTCGTCAGTTCTTTCTAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCAGCCCATGCTTCTGCAACTAACAACTGTTTTACAGTGTTCTTTAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATACAACTTTCAAAATATATCAAAGTTGTGTACCATACACGCGTTTCTGTTGGTATGCGTTTTAGGATGCTTTTTGAGACTGAAGAATCAAGTGTGCGCAGGTACATGGGGACTATAACTAGCATAAGTGACATGGATCCTGTTCGGTGGCAGAATTCTCATTGGAGGTCTGTCAAGAGTTTAATTCGAGAATTGTTGGATTAA 333 0.4144 MPSSVLSSDSMHIGLLAAAAHASATNNCFTVFFNPRASPSEFVIQLSKYIKVVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWQNSHWRSVKSLIRELLD 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04945 110 Gene3D - 57 106 - -
Vivi6g04945 110 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 102 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vivi6g04945 110 FunFam Auxin response factor 57 106 - -
Vivi6g04945 110 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04945 Vivi-Chr6 153376411 153379123 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04945 1 102 B3 DNA Binding Superfamily AT5G37020 89.216 3.64e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04945 - - vvo:131610588 199.904