Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04943 ATGCCGTCGTCAGTTCTTTCTAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCAGCCCATGCTTCTGCAACTAACAACTGTTTTACAGTGTTCTTTAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATACAACTTTCAAAATATATCAAAGTTGTGTACCATACACGCGTTTCTGTTGGTATGCGTTTTAGGATGCTTTTTGAGACTGAAGAATCAAGTGTGCGCAGGTACATGGGGACTATAACTAGCATAAGTGACATGGATCCTGTTCGGTGGCAGAATTCTCATTGGAGGTCTGTCAAGTTGCAGCTATTAGGAAGATGGCACAAGAGTATCGTGTGTATTTTAAAAAGAGCAGGCTGA 366 0.4235 MPSSVLSSDSMHIGLLAAAAHASATNNCFTVFFNPRASPSEFVIQLSKYIKVVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWQNSHWRSVKLQLLGRWHKSIVCILKRAG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04943 121 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 104 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vivi6g04943 121 Gene3D - 57 118 - -
Vivi6g04943 121 FunFam Auxin response factor 57 113 - -
Vivi6g04943 121 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04943 Vivi-Chr6 153376238 153379123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04943 1 103 B3 DNA Binding Superfamily AT5G37020 88.350 7.33e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04943 - - vvo:131610588 234.958