Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04941 ATGCCGTCGTCAGTTCTTTCTAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCAGCCCATGCTTCTGCAACTAACAACTGTTTTACAGTGTTCTTTAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATACAACTTTCAAAATATATCAAAGTTGTGTACCATACACGCGTTTCTGTTGGTATGCGTTTTAGGATGCTTTTTGAGACTGAAGAATCAAGTGTGCGCAGGTACATGGGGACTATAACTAGCATAAGTGACATGGATCCTGTTCGGTGGCAGAATTCTCATTGGAGGTCTGTCAAGTTGCAGCTATTAGGAAGATGGCACAAGAGTATCGTGTGTATTTTAAAAAGGCTGAATCTGACAAAAACAGTTCGCAAATTTTCTATTGATTCAAATTTAACACCCACCACTGGGTCTGAATTTCATTCTAGCCCGGCTGCTAATGTCATTAAGCATGATGAAAAAGTGGATGAAGAATCTGTTGAAGGTGCTTTTGTATTCACATCAGAAAATTTTGATAAATATGCTCATCAGTAA 543 0.3959 MPSSVLSSDSMHIGLLAAAAHASATNNCFTVFFNPRASPSEFVIQLSKYIKVVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWQNSHWRSVKLQLLGRWHKSIVCILKRLNLTKTVRKFSIDSNLTPTTGSEFHSSPAANVIKHDEKVDEESVEGAFVFTSENFDKYAHQ 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04941 180 FunFam Auxin response factor 57 114 - -
Vivi6g04941 180 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Vivi6g04941 180 Gene3D - 57 121 - -
Vivi6g04941 180 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 104 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04941 Vivi-Chr6 153374257 153379123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04941 1 103 B3 DNA Binding Superfamily AT5G37020 88.350 2.62e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04941 - - vvo:131610588 355.91