Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04916 ATGAGTCGGACTAGTGCAGCTGGTGCCAAGGGAAAGAAGAAGGGCGCAACCTTCACCATTGACTGTGCTAAGCCAGTTGAAGACAAGATCATGGACATTGCTTCCCTTGAGAAGTTTCTTCAAGAGAGGATCAAGGTCGGTGGCAAAGCCGGCGCTCTTGGTGATTCTGTCACTGTTACCAGGGAGAAATCCAAGATTACTGTTACCTCTGACAGCAACTTTTCGAAGAGGTATTTGAAGTACCTGACAAAAAAGTACTTGAAGAAGCACAATGTTCGTGATTGGCTCAGAGTGATTGCCTCAAACAAAGATAGAAACATCTATGAGTTGAGGTACTTCAACATTGCCGAGAACGAGGGAGAAGAGGAAGATTAA 375 0.4507 MSRTSAAGAKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04916 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Vivi6g04916 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Vivi6g04916 124 Gene3D - 5 124 IPR038526 -
Vivi6g04916 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04916 Vivi-Chr6 153227688 153229542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04916 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.710 6.89e-69 201