Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04906 ATGGAAGACACCGTCCCCGCCGGTAATAACAATTCGGAAAACGCCACCAACGCCATCAACATCAATACTTTCAGTTGTCCGATTCATTGCCCAGCGACCTTCATACCCTCATGGCAGCAAATAAAGGTCGCATTCGGCATACTTTTTGTGCTTTCGGTTTCTGCCACTATGATGTTCATGCTAGTCATCACTTTTGCTCCCTCTAATCTCAAGTTCCACATAACTGATGCTTCTCTCACAAAGTTCAACCTCACAGCCAACAACACTTTGGATTACAAATTAGAAGCCAACATCACGTCAAGAAATCCCAACAAGAACGTTGAAATATACTACAAGACGATCACCGCAGTTGCACGGTACAAAGATAATGAGTTTGCTAGAGTGAATCTGTCATCTTTTGATCAAGGCCACAAGAATACTACTTTTCTGCATGTAGTGTTTGAAGGGAAGGGTTTGATCAAACTCAAACCTGAGCAACTTTTCGAGTATAATCAAGAGACGCGTGTAGGGATCTACAATGACTTGGCTGTTGATTTGGATTTTTTAGTCAGGTATAAGTTTGTAACTCACACGAGTTATTCCTACAATCCGCCAATGGTGAAATGTCGTCGATTGAGTCTTTCTCTGATTTCTAATGGTAACTCATCATCAATACCTTCTTTTCATGTTTCAAGATGCAGAACTAGATTTTTCTTTATTAATCGTTAA 708 0.404 MEDTVPAGNNNSENATNAININTFSCPIHCPATFIPSWQQIKVAFGILFVLSVSATMMFMLVITFAPSNLKFHITDASLTKFNLTANNTLDYKLEANITSRNPNKNVEIYYKTITAVARYKDNEFARVNLSSFDQGHKNTTFLHVVFEGKGLIKLKPEQLFEYNQETRVGIYNDLAVDLDFLVRYKFVTHTSYSYNPPMVKCRRLSLSLISNGNSSSIPSFHVSRCRTRFFFINR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04906 235 Pfam Late embryogenesis abundant protein 97 187 IPR004864 -
Vivi6g04906 235 PANTHER OS05G0367900 PROTEIN 43 207 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04906 Vivi-Chr6 153086746 153087453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04906 69 202 SNARE and Associated Proteins AT1G32270 31.852 1.20e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04906 - - vvo:131615030 449.899