Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04879 ATGGAAGATCCCGTCCCCAGAAATAACAATTTGGAAAACGCCACCAACGCCATCAACCTCAATACTTTCAGTTGTCCGATTCCTTGCCCAGCGACCTGCATACCCTCATGTCAGCATATAAAGCTCGCACTCATCATACTTCTTTGGCTTGCAATTCTTCCCTGTTCGATGTTCCTGCTAATCATCACTTTTGCTCCCTCTAATCTCAAGTTCCACGTAACTGATGCTTCTCTCACAAAGTTCAACCTCACCGGCAACAACACTTTGGATTACAAACTAGAAGCCACCATCAGGTCAAGAAATCCCAACAAGAACGTTGAAATATACTACAGGACGATCACCGCAGTTGCATGGTACAAAGATAATGAGTTTGCTAGAGTGAATCTGTCACCTTTTGATCAAGGCCACAAGAATACCAGTTTTCTGCATGTAGTGTTTGAAGGGAAGGGTTTGATCAAACTCAAACCTAAACAACTTTTCGAGTATAATCAAGAGACGCGTGTAGGGATCTACAATGACTTGGCTGTTGATTTGGATCTTTTAGTCAGGTATAAGTTTAACACTCACAGGACTTATGCCTACAATCCGCCAATGGTGAAATGTCGTCGACTGAGTGTTTCTTTGATTTCTAATGGTAACTCATCATCACCACCTTCTTTTCATGTTTCAAGATGCAAAACTGAAATTTTCTTTGTTAATCGTTAA 705 0.4128 MEDPVPRNNNLENATNAINLNTFSCPIPCPATCIPSCQHIKLALIILLWLAILPCSMFLLIITFAPSNLKFHVTDASLTKFNLTGNNTLDYKLEATIRSRNPNKNVEIYYRTITAVAWYKDNEFARVNLSPFDQGHKNTSFLHVVFEGKGLIKLKPKQLFEYNQETRVGIYNDLAVDLDLLVRYKFNTHRTYAYNPPMVKCRRLSVSLISNGNSSSPPSFHVSRCKTEIFFVNR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04879 234 PANTHER OS05G0367900 PROTEIN 44 207 IPR044839 GO:0098542
Vivi6g04879 234 Pfam Late embryogenesis abundant protein 96 185 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04879 Vivi-Chr6 152822672 152823376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04879 68 201 SNARE and Associated Proteins AT1G32270 30.370 6.60e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04879 - - vvo:131615030 367.466