Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04871 ATGGGGCATTTATCCTCTATGTTCAATGGTTTGGCCAAGTCATTTTCATTAAGGAAAGGAGGGAATTCTGTGAGATGTGAAAGGAGAGAAGCGGTTGAAGAAATGGCCAAAGAAGCTAAGAAAAATGATTTGATTTTGTGTAGCTCTGGTGTTGTTAGTGTTGATGGTTCAAATAACTTTGCCTCAGTTTTCTCCAAAAGAGGCCAGAAAGGAACCAACCAAGATTGTTGCATAGTTTGGGAGGAATTTGGATGCCAAGATGACATGATATTCTGTGGAATATTTGATGGACATGGACCATGGGGTCATTTTGTGGCGAAAAGGGTAAGAGAGTCAATGCCAAGATCTTTGCTATGCAATTGGCAAGAGACACTTGCTGCACAATCTTCATCATCACTTGATAATGATCATGTAAAGGAAATTCCAGACAACAAGCAACAAAAATTCAATATATGGAAACACTCTTACTTGAAAACTTGTGCTTCCATCGATCAAGAACTCGAACATTGTCGAAAGTTTGATTCGTTTCACAGTGGAACAACCGCCCTCTCAATTGTTAGACAGGGTGAAACAATAATCATAGCAAATGTTGGCGATTCTCGTGCGGTATTAGCTACAACATCAGATGATGATGATGGAAGTTTAGTAGCAGTTCAACTAACAGTTGATTTCAAGCCGAATTTACCTCAAGAAGCAGAGAGAATAACTCAGTGTCAAGGACGCGTGTTCTGTTTAGAGGACGAACCCGGTGTGCATAGGGTATGGTTACCAGACGTAGAATCTCCGGGACTTGCCATGTCAAGAGCTTTTGGTGATTATTGTCTTAAAGAATATGGTCTTATTTCAGTGCCTGAAGTTACTCAAAGGAATATAAGCAGTAAAGATCAATTTGTTATTCTTGCATCGGACGGGGTTTGGGATGTGATATCGAATCAAGAAGCGGTAGATATTGTATCTTCAACAGAAGACAAAGCAAAATCGGCAAAATGTTTGGTGCAATGTGCAGTTCATGCATGGAAACGTAAGAGAAGGGGCATTGCTATTGATGATATTTCAGCTATTTGTCTGTTTTTTCATTCTTCTCTTTGTTCTGAGGAAGTTAGCACAATTGAAACTTTTAAATAG 1125 0.3938 MGHLSSMFNGLAKSFSLRKGGNSVRCERREAVEEMAKEAKKNDLILCSSGVVSVDGSNNFASVFSKRGQKGTNQDCCIVWEEFGCQDDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLAAQSSSSLDNDHVKEIPDNKQQKFNIWKHSYLKTCASIDQELEHCRKFDSFHSGTTALSIVRQGETIIIANVGDSRAVLATTSDDDDGSLVAVQLTVDFKPNLPQEAERITQCQGRVFCLEDEPGVHRVWLPDVESPGLAMSRAFGDYCLKEYGLISVPEVTQRNISSKDQFVILASDGVWDVISNQEAVDIVSSTEDKAKSAKCLVQCAVHAWKRKRRGIAIDDISAICLFFHSSLCSEEVSTIETFK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04871 374 SMART PP2C_4 51 356 IPR001932 -
Vivi6g04871 374 Gene3D - 41 360 IPR036457 -
Vivi6g04871 374 SUPERFAMILY PP2C-like 57 359 IPR036457 -
Vivi6g04871 374 FunFam Probable protein phosphatase 2C 34 51 360 - -
Vivi6g04871 374 CDD PP2Cc 59 358 IPR001932 -
Vivi6g04871 374 Pfam Protein phosphatase 2C 66 328 IPR001932 -
Vivi6g04871 374 PANTHER PROTEIN PHOSPHATASE 42 356 IPR015655 GO:0004722|GO:0006470
Vivi6g04871 374 ProSiteProfiles PPM-type phosphatase domain profile. 60 358 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04871 Vivi-Chr6 152661070 152663657 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04871 1 359 PP2C-type Phosphatase Gene Family AT3G05640 71.468 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04871 - - gmx:100808955 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04871 6 152661070 152663657 Vivi6g04871 6 152661070 152663657 ECH